Lates calcarifer (barramundi perch): 108882803
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Entry
108882803 CDS
T04895
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108882803
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108882803
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108882803
NCBI-ProteinID:
XP_018531036
UniProt:
A0AAJ7LUG6
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Position
LG8:complement(7044418..7047060)
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AA seq
335 aa
AA seq
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MEERERKGVKPDSQKTTLAASSSTPPVPQRVPEADSKAGDDDAEKTDVCSDKFDPLLALY
SPTVSLPFPNIKCFNNVAEYESFLKGGRGRAKPENVEKKRVKAMKGMADPERIERLKKLM
VKNPLPESEEGESSGTRRGRRRQKPQKNVLTRMPLCKGSPLGELYRCVEERIRVKVHIRT
FKGLRGVCSGFIVAFDKFWNMAMVDVDETYREPLLGEAYYHEKALTITRLFEKLKLQESS
GGDKSPKKHKAQEQLSEHQPGKSQASHATSRREDNRTELMLLDPKEDKHKASLKAQGPEA
GHKNASQTYGKVHTRHINQLFIRGESVILVNPQPL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaaagaaagggtgtgaaaccagacagtcagaaaacaacactggcagct
agttcaagtacgccaccggtaccgcagcgtgtcccggaggcagacagtaaagctggggac
gatgacgcagagaaaacagacgtctgctctgacaagtttgaccctctcttggccttgtac
tccccgaccgtgtcgcttccttttccaaacatcaaatgttttaacaatgtggcagagtac
gagagctttctcaagggcggcaggggtagagccaaaccggagaatgtggagaagaagcgg
gtgaaggcgatgaaagggatggcggacccggagcgcatcgagaggctgaagaagctcatg
gtgaaaaacccgctgccagagtcagaggagggggagagcagcggcacgcggcgggggagg
aggaggcagaagccccagaaaaatgtcctgacaaggatgcccttgtgtaaaggcagtcct
ttgggtgagctgtaccgctgtgttgaggagaggataagggtcaaagttcacatcaggacc
ttcaagggactgaggggcgtgtgctctggcttcattgtggccttcgacaagttctggaac
atggcaatggtggatgtagatgagacatacagagagcctctgcttggagaggcatactac
catgagaaagccctcaccattacacggctctttgagaagctaaagctccaggaaagctca
ggaggtgataaatcaccaaagaagcacaaagcccaggaacaactcagtgagcatcagcct
ggaaaaagccaggcttctcatgctacaagcaggagagaggacaacaggacagagttgatg
ttgttggaccccaaagaggataaacacaaagcctcgctaaaagcccagggcccagaggcc
ggtcacaagaacgcctcgcagacgtacggcaaggtccacacacgccacatcaaccagctt
ttcatccgcggtgagagtgttatcctggttaatccacagccactctga
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