Lates calcarifer (barramundi perch): 108882808
Help
Entry
108882808 CDS
T04895
Symbol
ppp2r2ba
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04382
Cornified envelope formation
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108882808 (ppp2r2ba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108882808 (ppp2r2ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108882808 (ppp2r2ba)
09158 Development and regeneration
04382 Cornified envelope formation
108882808 (ppp2r2ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108882808 (ppp2r2ba)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108882808 (ppp2r2ba)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882808 (ppp2r2ba)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108882808 (ppp2r2ba)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108882808 (ppp2r2ba)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108882808 (ppp2r2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
108882808
NCBI-ProteinID:
XP_018531042
UniProt:
A0A4W6CT72
LinkDB
All DBs
Position
LG8:complement(7078852..7122321)
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPSTILSSTCHTEADIISTVEFNSSGELLATGDKGGRVVVFQREQES
KSQPQRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNLKDDDGRIRDPSTITSLRVPVLQPMDLMVEATARRVFSNAHTYHIN
SISVNSDLQTFISTDDLRVNLWNLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMRQAALCDKHCKYFEEPEDPSTRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPLETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctccgagcaccatcctgtcc
tccacttgccacaccgaagctgacattatctcaacggtggagtttaactcatcgggggag
ctgttggccaccggggataaaggaggcagagtggttgtcttccagagggagcaggagagt
aaaagccagccccagcgacgaggggaatacaatgtttacagcacattccagagccacgag
ccggagtttgactacctgaagagtttggagattgaggagaagatcaacaagatcaaatgg
cttcctcagcagaacgccgcctacttcctgctgtccaccaacgacaagacagtgaagctg
tggaagatcagcgagagagataagcgtccggagggctacaacctgaaggatgacgacgga
cggatcagagacccgtcgaccatcacctcgctacgggtgcctgtgctgcagcccatggac
ttgatggttgaagctacagccaggcgtgtattcagcaacgctcacacctaccacatcaac
tccatctctgtcaactctgaccttcagacattcatctccactgacgacctcagggtgaac
ctgtggaacctggagatcactgaccgcagcttcaacattgtggacatcaaaccagccaac
atggaggagctgacggaggtgatcacctcagctgagtttcacccccagcagtgtcacacc
ttcgcctacagcagcagcaagggctcgatacgcctctgtgacatgagacaggctgcgctc
tgtgacaagcactgcaaatactttgaggagccggaggatccgtccactcgctcctttttc
tctgaaatcatctcatccatctcagacgtgaagttcagccacaatgggcgctacctgatg
acaagggactacctcactgtcaaggtgtgggaccttcaaatggagaacaaaccgctggag
acataccaggttcatgactatttacggggcaaactttgttctctgtatgagaatgactgc
atctttgacaagtttgagtgtgtctggaatggatcagacagtgtcataatgaccggctcc
tataacaacttcttccgaatgtttgaccggaacaccaaacgtgacgtcacactggaagca
tccagagaaaatagcaaacccagagccattctcaagcctcgcaaggtgtgtgtaggtggg
aagcgccgtaaggatgagatcagtgtagacagcttagacttcagcaagaagatccttcac
accacgtggcacccacatgagaacatcattgctgtagctgccaccaacaacctctacatc
ttccaagacaaggtcaactaa
DBGET
integrated database retrieval system
