Lates calcarifer (barramundi perch): 108882810
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Entry
108882810 CDS
T04895
Symbol
bnip1a
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108882810 (bnip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108882810 (bnip1a)
Membrane trafficking [BR:
lcf04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
108882810 (bnip1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
Adhesin_P1_N
Motif
Other DBs
NCBI-GeneID:
108882810
NCBI-ProteinID:
XP_018531047
UniProt:
A0A4W6CTE6
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Position
LG8:7130141..7134826
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AA seq
228 aa
AA seq
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MASSDVHVRICEQEILKYDLEIKALIQDITECTGPQSKLTELNADVKKSFHNLRLRIQDL
EQMAMEQDKESDKQALISQVEGHRKQMLSNQTVWRKANLASKLSIDNMEKQALLNGADST
VRQRKMTKEGLAQTTSDITENLMSISRMMAQQVQQSEETMTSLATSSRTIQETNEEFKTM
TGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcagatgtccacgtccgaatatgtgaacaagaaatactcaaatatgacttg
gaaatcaaagctctcatccaggatatcaccgagtgcacaggtcctcaaagcaagctgaca
gaactgaacgcagatgtgaagaagagtttccacaatctcagactgcggattcaggattta
gagcagatggcgatggagcaagacaaagagtcagacaagcaggctttgatcagtcaggta
gaaggacacaggaaacagatgctgagtaaccaaacagtttggaggaaagccaaccttgcc
agcaaactgtccatagacaatatggaaaagcaggcacttcttaatggagccgatagcact
gtgagacagaggaagatgaccaaagagggcctggcccagacaaccagcgacattacagaa
aatctcatgagcatcagccggatgatggcccagcaggttcagcagagcgaggagactatg
acgtcactagcaacctcctcaaggacaatccaggagaccaacgaggaatttaagaccatg
actgggaccatccagctcgggagaaaactcatcaccaagtacaaccgcagggagctgact
gataaactcctcatcttcctggcgttggctctcttcctcgccacagttctctacatcctt
aagaagagactcttccccttcctgtaa
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