Lates calcarifer (barramundi perch): 108882821
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Entry
108882821 CDS
T04895
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108882821 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108882821 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108882821 (ldb3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
DUF6288
Motif
Other DBs
NCBI-GeneID:
108882821
NCBI-ProteinID:
XP_018531065
UniProt:
A0AAJ7LSK5
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Position
LG23:complement(13711064..13724853)
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AA seq
290 aa
AA seq
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MSTYTVTLNGPAPWGFRLQGGKDFNMPLTISRITPGSKAAGGSLAQGDIISAIDGVSTDG
MTHLDAQNKIKSATTKLSLTMQKSRRPAPVPTATPRMDSPMPVIPHQKVIANTAANVEYT
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
DSEEAGSPLAGVLPIKDPVVDCASPVYQAVIRPGETTQDMSDWARRAANLQSKSFRILAH
VTGTEYLQDPDEEALQRSREKFESEVKGPRFAKLKNWHHGLSAQILNVQE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgtacacagtgactctgaacggccctgctccatggggcttcagactacaggga
ggaaaggacttcaacatgccactcaccatctccaggataactccaggcagcaaggcagcg
ggcggcagcctggctcaaggcgacatcatctcagccatcgatggggtcagcactgatggg
atgacgcacctggacgcccagaacaagatcaagtctgctaccaccaaactgtcactcacc
atgcagaaatcaagacgtcctgcaccagttcccacagcaactcctagaatggactcaccc
atgccagtcatcccccaccagaaggttatcgcaaacacagctgcaaatgtggagtacact
cctagcttcaaccccatagctctgaaagactcggccctgtccacccacaagcccattgag
gtgaggggtccggggggaaaggccaccatcgttcacgctcagtacaacacaccaatcagc
atgtactcacaggacgccatcatggacgccatagcaggccagtcgcaggccaagggacac
gatagtgaggaggcaggctcccccttggctggagttctgcctatcaaggaccctgtggta
gactgtgcatctccggtgtaccaggcagtgatcaggccaggagagaccacccaggacatg
tctgactgggctcgtcgtgctgccaacctgcagtccaagagcttcagaatcctggcccac
gtcactggcaccgaatacctgcaagacccagatgaggaagccctgcagaggtcgagagag
aagtttgaatcagaggtgaaaggacctcgctttgccaagctgaagaactggcaccacgga
ctgtctgcacagatcctcaatgtccaggaataa
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