Lates calcarifer (barramundi perch): 108882849
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Entry
108882849 CDS
T04895
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108882849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108882849
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108882849
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
108882849
NCBI-ProteinID:
XP_018531118
UniProt:
A0A4W6DBH9
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Position
LG8:7885863..7917489
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AA seq
435 aa
AA seq
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MSGEQKEGQEAMNVYSVTLSGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDW
VVSICDSNAEDMTHVEAQNKIRAATDSLTLTLSKAFKAGGDQKDSLAPASVQPKYSFAPS
TTINKMARPFTAGGGSANSGPAIKPVAYSPKLNTPRSQGRASMQQPQNGLEPTPSPAKAQ
AADKPDGSKTAAVAAGSSGPSCRPPWVTDPNFADRYRPDKTSTVVTQHQQPAQPTPMQNR
SSILQAAQQAPEDSGRTPVCGACNKIIRGRYLVALGRSWHPEEFTCSQCKAVLDEGGFFE
ERGSVYCTKCHDNRYAPNCAKCKKKITGEIMHALKMTYHVQCFKCAACKTPIRNQAFYME
EGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTFYS
KKDKPLCKGHAFAPV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgaacagaaggagggacaggaggctatgaacgtatactccgtaaccctcagc
ggcccagcgccgtggggcttcaggctgcagggtggcaaggacttcagcatgcccctcacc
gtgtccaggctgaccccaggtggtaaggcggctcaggccggcgttggggtgggagactgg
gtggtgtccatctgtgactccaatgcagaggacatgacccatgtggaggcacaaaacaag
atcagagcagcaacagactccctcaccctcaccctcagcaaagctttcaaagcgggtgga
gaccagaaggactcgcttgctccggcttctgttcaaccaaagtactcctttgcccccagc
acaaccattaacaagatggcgaggccatttacagcaggtggtggtagtgccaactcagga
cctgctattaaacctgttgcctactcgcctaaacttaacactccacgctcacagggccgt
gccagtatgcagcagccacagaatggccttgagccaactccctcacctgccaaggcccag
gcagcagataaaccagatggttccaagactgcagctgtggcagcaggcagttcaggtccc
tcctgccgaccaccgtgggtcaccgaccctaatttcgctgaccgctatcgcccggacaag
accagcaccgtcgtaacccagcaccagcagccggcccagcccacgcccatgcagaaccgc
agctccatcctgcaggcggctcagcaggcgcccgaggacagcgggaggaccccagtgtgc
ggcgcctgcaacaaaatcatcaggggtcggtacctggtagcgctggggcgttcttggcac
ccggaggagttcacgtgttcgcagtgtaaggcggtcctggacgaggggggcttcttcgag
gagagggggtctgtctactgcaccaagtgccacgataaccgatatgctcctaactgcgcc
aagtgcaaaaagaagatcactggggaaatcatgcacgccctgaagatgacctaccatgtt
cagtgtttcaagtgtgcggcctgcaagactcctattaggaaccaagctttttacatggag
gagggcgaaccctactgtgagagagactatgagaagatgtttggcaccaaatgccacggc
tgtgactttaagattgatgccggggatcggttcctggaggccttgggctacagctggcac
gatacgtgcttcgtctgtgctctctgccaaatcaacctggaggggaagacgttctactcg
aagaaggataagcccctgtgcaaaggccacgcttttgctccagtgtga
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