Lates calcarifer (barramundi perch): 108882872
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Entry
108882872 CDS
T04895
Name
(RefSeq) transforming growth factor beta activator LRRC32
KO
K26316
transforming growth factor beta activator LRRC32
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108882872
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
108882872
NCBI-ProteinID:
XP_018531151
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Position
LG8:complement(8379335..8382434)
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AA seq
677 aa
AA seq
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MSSDNSSDPVQLNSRRSSSRGRMVRHMFSNLLLLWSLSHDIYVTGLTDDDPKEQSWNNQN
LYSVPLDLDVRLRRLDLSNNFIRQLHTLVLPNLEQLDLSANQLDLISEGAFENLAQLEEL
NLSRNALNNNLGGNSKALQSISGLRSLDISMNGLSDDAVELYLQQKSSLDQLKMTGNALT
RLSHSLFKDSKGLRAITIDDNLISVIEPGTFEPLSQLEMLSLAKNNLEHICDFKLYQVKY
LNLSQNSLEFFVTREDNRLYGLEVLDLSFNKLLYFPIVPKMNYLRYLHLQNNMVGALNSE
AAMVSEANSLYNEIMDKNIIRKNNLHSNWRQMPVTYIDLSYNHFRSFPLETLSLLSALET
LNFSHNCLQNIIWNIRDYTDLGYHRLLFFPSLKHLDLQSNGLVHISPLFLNALRKIDTLN
LQDNSVQPCALSDHLRSSQSTQQRNLNTSCVAFGQLRTLKHLSLKGNNIKMLHPNTFQET
SLVSLNLARNAHIVMHVSALEGVEKTLESLVMSEINMTSSDLSLPCMPALTQLNLSNNHL
DIIPSSLSCSPLREIDIRNNHLVSLNHSLIHALSVNLNLMYISGNYFNCCDSKWLTALNE
SEIKLPDLNDTACFTGDGNIMITEYLKSSSEKCLFHREAQEVHFGQIFIIVLFVFVLLTV
FIIFTRKLCCTQRSFIV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgacaacagtagtgatcctgtacagcttaacagcaggagaagcagcagcaga
gggagaatggtcagacatatgttctctaatctcttactactctggtcactcagccatgac
atttatgtaactggactgacagatgatgatcccaaggagcagtcctggaacaaccagaac
ctctactctgtccctctggatttggatgtaagacttagaagactagacctgtccaataac
ttcatcagacagttgcacacacttgttttgccaaacttggaacagctggacctgagcgcc
aaccagctggatctcatctccgagggggcttttgaaaacctggctcaacttgaagagttg
aatttgtccagaaatgcgctgaacaacaaccttggcggcaacagcaaagccctccaatcc
atcagtgggctgaggagtttggacatatcgatgaatggtctgagtgatgatgcagtggag
ctgtaccttcaacagaaatcgtctcttgatcaacttaagatgactggtaatgctttaaca
agactttcacacagcttgttcaaagacagtaaaggcttgagggccattactattgatgac
aatctgatatcagtgatagaaccagggacatttgaaccattgagccaattggagatgcta
agcttggccaaaaataaccttgaacatatctgtgattttaaattatatcaagttaagtat
ctgaaccttagtcaaaattcactggaattttttgttacacgtgaggacaaccggttgtat
gggcttgaagttcttgatttgagtttcaacaaactcctttatttcccaattgttccaaaa
atgaactatttgaggtatcttcatttacagaataacatggttggtgccttaaattcagag
gctgcaatggtatcagaggccaattctctttataatgagattatggataagaatataatt
agaaaaaataacctacactcaaactggaggcagatgccagtgacctacattgacctgagc
tataaccacttcaggtctttcccactggagactttgagccttctctcagctttagaaact
ctgaatttcagtcacaattgtctgcaaaacattatctggaatattagagattacactgat
ctaggataccaccggttgcttttctttccctccttaaagcaccttgacctgcaaagcaat
ggactcgtacacatttccccactctttctcaacgcactcagaaaaatagatacattaaat
ctacaagacaattctgtacagccttgtgctctctcagaccatttgagaagctctcagtca
acacaacaaagaaatctcaacacatcttgcgttgccttcgggcagctaaggactcttaaa
cacctcagtctcaaaggaaacaatataaaaatgcttcatccaaacacatttcaggaaacc
tctttggtttccctcaatcttgcaagaaatgctcacatagtaatgcatgtgagtgcacta
gagggggtggagaaaactcttgaatccttggttatgagtgagataaacatgactagctct
gatctgtctttgccctgtatgccagcattaactcagctgaacttatccaacaaccatctt
gatattatacccagcagtttaagctgctctccgctgagagaaattgacattagaaataac
catcttgtgtctttaaaccattctttgattcacgctttatctgtaaaccttaatctcatg
tatatcagtggaaattactttaactgctgtgactctaaatggctgacagccctgaatgag
tcggaaattaaactgcctgatctcaatgacactgcatgctttacaggtgatggtaacatt
atgataacagagtatctaaaaagctcttcagagaaatgtttgtttcacagagaagcacag
gaagttcactttggacaaatcttcattattgttttatttgtatttgtattattaacagtg
ttcatcatatttaccaggaagctgtgttgcacacaaagatcatttatagtgtga
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