Lates calcarifer (barramundi perch): 108882873
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Entry
108882873 CDS
T04895
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108882873
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108882873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108882873
04090 CD molecules [BR:
lcf04090
]
108882873
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Tumor necrosis fators
108882873
CD molecules [BR:
lcf04090
]
Proteins
108882873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
108882873
NCBI-ProteinID:
XP_018531152
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Position
LG8:complement(8382574..8385485)
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AA seq
264 aa
AA seq
DB search
MLYNALLSITAFMFCLSLFLVHRASVLQNDFQKLQGDLILQLNQPRSEGVNGKTAKMSKT
REDIKPSTFQKAQSSLKMSSRRVKREQGSCRGPTSFLQLTANTNKQPDIRGNIAVIPWTV
SAQQGNAISQRENRIVVQEDGYYLVFGQVLCHCNSSITKLILHLICSSFSANDLLNSQVL
FKSPSTVMGYIIRSWGSTNAETSTDLLHCLQEMPEQTNPANTCYAAGIVQLHQDDELELV
IPDRPEALISMDAEWTFFGVIQLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacaatgctttattatcaataacggcatttatgttttgtcttagtcttttcctg
gtgcacagagccagtgttttgcaaaatgattttcaaaaactccaaggggacttaattcta
caattaaatcagccacgttctgagggagtcaatgggaaaacggccaagatgtctaaaaca
agggaggacattaagccaagtactttccaaaaagctcagagttctctgaagatgtcttct
aggagggtaaaacgggaacaaggcagctgcagaggtccaacatcattcctgcagttaact
gctaatactaacaaacaaccagacataagaggaaatatagcagtgatcccttggactgtt
tctgcgcagcaaggaaatgcaatttcacaaagggaaaacagaattgttgtccaagaagat
ggttattacttggtgtttggacaagtattgtgtcactgtaactcaagcataactaagttg
atattacatctgatttgttccagcttttcagctaatgatctgcttaattcacaggttttg
ttcaaaagcccaagcacagttatgggttatattattcgaagttggggctccactaatgca
gagacatcgacagacctcttgcactgcctgcaagagatgcctgaacaaacaaatcctgcc
aacacatgctatgctgcaggtattgtgcagttgcatcaggacgatgagctagagctggtg
atcccagacaggcctgaagccctcatctcaatggatgcagaatggaccttctttggtgtc
atacagctaaactga
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