Lates calcarifer (barramundi perch): 108882874
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Entry
108882874 CDS
T04895
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108882874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108882874
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Tumor necrosis fators
108882874
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Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
108882874
NCBI-ProteinID:
XP_018531155
UniProt:
A0A4W6DGE4
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Position
LG8:complement(8385787..8398135)
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AA seq
398 aa
AA seq
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MNSRGLARDKRADYAEIKSILLALRPIMACDGSPAEDFPDKVMPRAAPCTCNKKCRSRSS
SVVFLGLFLLSLSLHAVTLVCYLDLRSEVKREIIHQKRDSMLTLAGSDLADPAAVLSTGH
PRLDSGSSRGAEGHEQEKLLHRNSDFHATEDNRGITQRAKRSPGKQPETESTGKEKRKDK
KKGKKRSVPGPPGPPGPPGPQGPPGIPGIPGIPGSIGVGPAGPPGPPGPQGPPGAQGPAG
VLDKTKTKEFQPAVVHLQGQETTIQVREDLSEGILRNWKMVSIHHRVFKMHPRSGELEVL
LDGVYFIYSQVEVYYLNFTDIASYEVMVDSNPFLRCTCSIETGQRKFNTCYTAGVSLLRA
GQRISIRIVYEDTLISMTNHTTFLGSVRLGEAPSAGQN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccgcggcctcgcgcgagacaaacgagccgattatgccgagataaagagcatc
ttactcgcgctccgtccgataatggcatgcgatggttcacccgcggaggatttcccggac
aaagtgatgcccagagcggctccctgcacgtgcaacaagaagtgcaggagtcggagcagc
agtgtcgtcttcctgggattattcctgctgtcgctgtctctgcacgctgtcaccctcgtc
tgctatttggacctgcggtccgaagtcaaaagggaaattatccaccagaagcgggactcc
atgttgacacttgcggggagtgacctggctgacccggcggcggtgctctcgaccggccac
ccgcgactggactccggcagcagccgcggcgcagaaggtcatgagcaggagaagttactg
cacagaaatagcgacttccatgccacagaggataacaggggcataactcagcgagcgaaa
aggagtcctggcaagcagccagagacagaatcgactggaaaggaaaaaaggaaagacaag
aaaaaagggaagaaaaggtctgtgccaggcccccctggtccccctggtcccccaggccca
caggggccaccgggcatccctggaatccccggtattccaggaagcattggcgtggggcct
gcaggaccccctggacctcctgggccacagggaccgccgggcgctcaaggtccagcaggg
gtccttgataagacgaaaacaaaagaattccagcctgcagtggttcatttgcaagggcag
gaaacaaccatccaagtgagagaagatctgtctgaaggcatccttaggaactggaagatg
gtgtccatccatcaccgtgtgtttaaaatgcaccctcgctctggagagctagaggtgctg
ttggacggtgtctacttcatatatagtcaggtagaagtgtactacctcaacttcaccgac
attgccagctatgaggtgatggtggactccaacccgttcctccgctgcacctgcagcatt
gagacagggcagcgcaagttcaacacctgctacacggccggcgtgagcctgctccgcgcc
ggccagaggatctccatacgcatagtgtatgaggacacactcatcagtatgaccaaccac
accaccttcctgggaagtgtcagacttggagaggctccatctgctggacagaactga
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