Lates calcarifer (barramundi perch): 108882893
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Entry
108882893 CDS
T04895
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108882893
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108882893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
108882893
NCBI-ProteinID:
XP_018531197
UniProt:
A0AAJ7PLM1
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Position
LG23:complement(13880034..13885890)
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AA seq
1039 aa
AA seq
DB search
MEQKSVADKTDEVFQESVPSIQAVVRHFNASITAQSGSNVVAPSIIGSTIGNININITST
GQGSIVSSKEAVNHDIADSCGALQPQNNKITECQQKLKATLKRKFSHILEGMTTEANKIP
LNNIYTELYITEGGNTEVNNEHEVRQIETASKIHVAQEKSIHCNQLFVPLPGQDQHIRTV
ITRGVAGIGKTVSANKFTLDWAEERANTILEFVFPLSFRELNLMRKKTFSLVELLSVFFP
ETKDTGIFTNGKYKMLFILDGLDESRLSLDFHKSEIISDVMQPTTIAVLLTNLIRGRLLP
LSLVWITSRPVASSQIPVEYIDLVTEVRGFNNPQKDEYFRRKINNENLANRVITHVKSCR
SLHIMCHIPIFCWMASSVLEKKLAMIDSKDTPKTLTQMYIHFLYLFVETMKKRLPGRRES
NADCMRTNLIALGKLAFKELEKGQLIFYESDLNQNGIKLMQASMFSGVYTQIFKEEVTLC
KEKMFCFVHLSVQEFFAALYVYLMFHNDNVNVLVKKSSASRLFLFRDSSELILYKEAVER
ALQCKKGNFDIFLRFLLGLSLESNQTLLKHLMTSNRTSQRTRAEIIKHIKERIRSSTSPD
RCLNLFHCLNELNDHSLVEEIQGYLSSGSLDKAILSPAQWATLVFVLLTSEEDLSEFELS
KYARSEEGLLRLQPVMKAAQVAKLNACNLTVACCKKLAEVISSSQFRELDLSNNNLADSG
IELLSDGLKDSKLETLRLRSCNLTECSSDVLASFISSASCQLKLLDLTDNDFEDGGVARL
SAGLGSPHCKLEILTLPLCRVTEEGCTFLASALNSSRLRELDLSYNHPGNLGLQLLSALL
DDPQCSLHKLSVEQCDESRIQPGPKKYTTKLTLDPNTAQNDLSLSEGDTKATRWTKQPYP
DHPERFDYWRQVLCREGLIGRCYWETEWCGRAFIGVAYRRMCRKGEDSDSWLGHNDSSWG
LTCNKDSYRTLHKGISTAVTTPPNSNKVGVFLDWSAGTLAFYRVSCGTLTLLHTFHTTFT
EPVYPAFHLAWVDSTIYLC
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagagtgttgctgataaaacagatgaagtctttcaagagtcagttccctct
attcaggctgtggttcgccatttcaatgcaagcatcactgctcagagtggaagcaatgtg
gtcgctccctccatcattggttctaccatcggcaacataaacatcaatatcacctcaaca
ggccaagggtctattgtttcatcaaaagaagcagtgaaccatgacattgcagacagctgt
ggagctctgcagcctcaaaacaacaagatcacagaatgccaacagaaactgaaagctact
ctgaagaggaagttcagccacattcttgaggggatgacaacagaggcgaacaaaatacct
ctcaataatatctacacagagctctacatcactgagggaggaaatactgaagtcaataat
gagcatgaagtgagacagattgagacagcttccaagatacatgttgcccaggagaaatca
attcactgcaatcaactctttgttcctctacctggacaagaccaacacataagaactgtg
atcacaaggggtgttgctggcattggaaaaacagtatctgccaataagttcactctagac
tgggctgaggagagagccaacaccatcctggaatttgtattccctctctctttccgagag
ctgaatctgatgagaaagaaaaccttcagtctagtggagcttctcagtgtttttttccca
gaaacaaaagacacaggaatcttcactaatggtaaatacaaaatgctcttcatcctcgat
ggtctggatgaaagtcgtctgtctttggacttccacaaaagtgaaataatttctgatgtg
atgcagccaaccacaattgccgtgcttctgactaacctcatcaggggaagactgcttcct
ctgagtctcgtttggataacatctcgcccagtagcctccagtcagatcccagtggagtac
attgatctagtgacagaagttcgagggtttaacaacccgcagaaagatgagtacttcagg
aggaaaattaacaacgagaacttggcaaacagggtaatcacccatgtgaaatcctgcagg
agtcttcacatcatgtgccacataccaatcttctgttggatggcatcgagtgttcttgaa
aagaagctggcaatgatagacagtaaagacacgccaaagactctcactcaaatgtacata
cacttcttgtatttgtttgtggagaccatgaagaagaggctgcctggaagaagagagtcg
aacgccgactgcatgagaactaacctaatcgcactgggtaaactggccttcaaggagctt
gagaagggccagctgatcttctatgagagtgacctcaaccaaaatggtataaaactgatg
caggcatccatgttctctggagtctacacacagatcttcaaagaggaggtgacactgtgc
aaggagaagatgttctgctttgtgcatctgagcgttcaggaattctttgctgcgttgtat
gtctacctcatgttccacaatgacaacgtcaacgtcttggtcaagaagtcatctgcttcg
agacttttcctgttcagagactcttcagagctcatcctctacaaagaagcagtggaaagg
gctttgcagtgtaaaaaaggtaattttgacatctttctgcgcttccttttgggcctgtct
ctggagtccaatcagactctgttgaaacatctaatgacaagcaacagaacaagccaaagg
acaagagcggagatcattaaacacatcaaggagaggatcaggtcaagtacatccccagac
agatgcctcaatctctttcactgcctgaatgagctgaatgaccattcccttgtggaggag
attcagggctacctcagctcaggcagtcttgacaaagccatactttcacctgctcagtgg
gcaactttggtctttgtattactgacttcagaggaagatctgagtgagtttgaactgagc
aaatacgccaggtctgaggagggacttctgaggctgcaacctgttatgaaagcagctcaa
gtggcaaagctaaatgcatgcaatctcactgtggcctgctgtaaaaaactggcagaagtc
atcagctcatcccaattcagagagctggacttaagtaacaataacctggcagactcagga
atagaactgctctctgatggactgaaggacagcaaattggagacactaagactgaggagc
tgcaacctaacagagtgcagctcagatgtcctggcatcatttatcagttcagcatcctgc
cagctgaaactactagatctcactgacaatgactttgaggacggaggagttgcaaggctt
tctgctggactggggagtcctcactgtaaactggagatactcactttgcccctgtgcaga
gtgacagaagaaggctgcactttcctggcttctgctctgaactcatcacgtctgagagag
ctcgacctgagctacaaccacccaggaaacctaggtctgcagctgctgtcggctctgcta
gatgacccacaatgcagcctgcataaactcagtgtggaacagtgtgatgaatccagaatt
cagccaggtccaaagaaatataccacgaaactgaccctggacccaaacacagcgcagaac
gacctttctctgtctgagggagacaccaaagcaactcgttggaccaagcagccgtatcct
gatcacccagagaggtttgattactggagacaggtgttgtgcagggagggactgattggg
cgctgctactgggagacagaatggtgtgggagagctttcataggagtggcctacagacgg
atgtgcaggaagggagaggatagtgacagctggttaggccacaatgactcttcctggggc
ctgacctgcaacaaagatagctacaggaccctgcacaaaggcataagcactgctgtaacc
accccacccaactccaataaagtaggagtctttctggactggtcagcggggacactggcc
ttctacagggtctcctgtggtacattgaccctcctccacaccttccacaccaccttcaca
gagcctgtttacccagcgtttcaccttgcctgggtggactccacaatttacctgtgctag
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