KEGG   Lates calcarifer (barramundi perch): 108882905
Entry
108882905         CDS       T04895                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108882905
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108882905
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108882905
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 DUF3199 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 108882905
NCBI-ProteinID: XP_018531211
UniProt: A0A4W6E512
LinkDB
Position
LG8:complement(9121575..9128716)
AA seq 647 aa
MEGSDSLEQSGSDLPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFNRLQQIKDGPEQQNNTPSTEVGEDPVVQPENSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPDEAPEGQEVVA
NVEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVSQEILGEPPSSPAALPVQAPLSPSP
RRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDGLANPRQAHSSQGPNSATNAPPVPQV
EGSSRTRQHVLSRQSTADTDVQPSRAGAESVPEAQNVESQEGEAAGGEGGGEGGAGGRRP
PTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVR
TYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSTRGASTP
SDLGEALNNPDATPAAAPAADVDEAPVAAGVRARTVETDVVEGLATGPPASGGRARPRPP
ISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEY
AEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggaagggtctgacagcctcgagcagagtggcagtgacctgccagagtcacaacgcaga
aggcagctggaccggctggatagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatctcttgggtactccaggagaggttaca
gaggatgagctgtttaatagacttcagcaaatcaaagatggtccagaacagcagaacaac
acccctagtactgaagttggagaagatccagttgtacaaccagaaaactctgaggatcct
gccagtggggatagtctcctggactggctgaacacagtaaggcgcacaggcaacacaacc
agaactggtcatcgtggaaatcagtcatggcgggcagtaagccaaaccaacccaaacagc
ggcgattttcgcttcagcctggaaatcagtgtgaaccgtaacctggctgaacaacaggca
gctgctgaaggggagcaagagtctccagatgaggctccagagggtcaagaagttgtggca
aatgttgaaccacaggtgcccatggagacagaagtggtggaagaaccagttgtagaggag
ttggctgtcatagtggaaccagagcctgaactggaagaggttgtttcacaagagatttta
ggagaacctcccagctcacctgctgccctgccagtacaagccccactttctccctctcca
cgcagaggacaaaggagagcccggagccgcagtccggaaccacgcaggaccagggcccgt
acagccaggagtcgttcccctctcagcttggatcagcttgatggtcttgctaatccacgc
caggctcacagctctcaaggccctaactctgccaccaatgctccccctgtgcctcaagtg
gagggcagttcacggactcgacagcatgttctttccaggcaaagcactgctgacactgat
gttcagccatctagggctggtgcagaatcagtcccagaggcccaaaacgttgaatctcag
gaaggagaagctgctgggggagaaggtggtggagaagggggcgcaggagggcgccgtccc
cctactattatgcttgatctccaggtgcgtcgcgtgcgtccaggcgaatatcggcaaaga
gacagcattgctagtcgtacccgctcacgctcccagaactcaaacaacacatttctttat
gagagtgagcgtggtggatttcgtaggactttttcacgctctgaacgtgctggtgtgagg
acctacgtcagcactattcgcatccctatccgaagaatctctgatgcgggtttgggggag
gcaacctcaatggctctccagtctatgattagacagattatgactggttttggtgaactt
ggctacctcatggattcagactctgattcttcagattcaacccgtggagccagcacacct
tcagatctgggtgaagccctcaataacccagatgctactcctgctgctgctcctgctgct
gatgttgatgaagcacctgtggctgctggagtcagagcaaggacagttgagactgatgtg
gttgaggggcttgccactgggccacctgcctctggtggcagggctcgaccgagaccacct
atcagtctagaggagcccagctcactgcccttcctgcggctcgcccacttcttcctttta
aatgatgatgacgaggaccagcctcaagggctaactaaagagcagattgacaacctctcc
atgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgcataacagagtat
gcagaaggtaacaagctacgtaagctgccctgctctcatgagtaccatgtgcactgcatc
gatcgctggctgtctgaaaactccacttgtcccatctgccgcagggccgtcctggtgtcg
gccaatcgagagagtgtggtgtag

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