Lates calcarifer (barramundi perch): 108882905
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Entry
108882905 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108882905
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108882905
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108882905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
DUF3199
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108882905
NCBI-ProteinID:
XP_018531211
UniProt:
A0A4W6E512
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Position
LG8:complement(9121575..9128716)
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AA seq
647 aa
AA seq
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MEGSDSLEQSGSDLPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFNRLQQIKDGPEQQNNTPSTEVGEDPVVQPENSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPDEAPEGQEVVA
NVEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVSQEILGEPPSSPAALPVQAPLSPSP
RRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDGLANPRQAHSSQGPNSATNAPPVPQV
EGSSRTRQHVLSRQSTADTDVQPSRAGAESVPEAQNVESQEGEAAGGEGGGEGGAGGRRP
PTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVR
TYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSTRGASTP
SDLGEALNNPDATPAAAPAADVDEAPVAAGVRARTVETDVVEGLATGPPASGGRARPRPP
ISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEY
AEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagcctcgagcagagtggcagtgacctgccagagtcacaacgcaga
aggcagctggaccggctggatagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatctcttgggtactccaggagaggttaca
gaggatgagctgtttaatagacttcagcaaatcaaagatggtccagaacagcagaacaac
acccctagtactgaagttggagaagatccagttgtacaaccagaaaactctgaggatcct
gccagtggggatagtctcctggactggctgaacacagtaaggcgcacaggcaacacaacc
agaactggtcatcgtggaaatcagtcatggcgggcagtaagccaaaccaacccaaacagc
ggcgattttcgcttcagcctggaaatcagtgtgaaccgtaacctggctgaacaacaggca
gctgctgaaggggagcaagagtctccagatgaggctccagagggtcaagaagttgtggca
aatgttgaaccacaggtgcccatggagacagaagtggtggaagaaccagttgtagaggag
ttggctgtcatagtggaaccagagcctgaactggaagaggttgtttcacaagagatttta
ggagaacctcccagctcacctgctgccctgccagtacaagccccactttctccctctcca
cgcagaggacaaaggagagcccggagccgcagtccggaaccacgcaggaccagggcccgt
acagccaggagtcgttcccctctcagcttggatcagcttgatggtcttgctaatccacgc
caggctcacagctctcaaggccctaactctgccaccaatgctccccctgtgcctcaagtg
gagggcagttcacggactcgacagcatgttctttccaggcaaagcactgctgacactgat
gttcagccatctagggctggtgcagaatcagtcccagaggcccaaaacgttgaatctcag
gaaggagaagctgctgggggagaaggtggtggagaagggggcgcaggagggcgccgtccc
cctactattatgcttgatctccaggtgcgtcgcgtgcgtccaggcgaatatcggcaaaga
gacagcattgctagtcgtacccgctcacgctcccagaactcaaacaacacatttctttat
gagagtgagcgtggtggatttcgtaggactttttcacgctctgaacgtgctggtgtgagg
acctacgtcagcactattcgcatccctatccgaagaatctctgatgcgggtttgggggag
gcaacctcaatggctctccagtctatgattagacagattatgactggttttggtgaactt
ggctacctcatggattcagactctgattcttcagattcaacccgtggagccagcacacct
tcagatctgggtgaagccctcaataacccagatgctactcctgctgctgctcctgctgct
gatgttgatgaagcacctgtggctgctggagtcagagcaaggacagttgagactgatgtg
gttgaggggcttgccactgggccacctgcctctggtggcagggctcgaccgagaccacct
atcagtctagaggagcccagctcactgcccttcctgcggctcgcccacttcttcctttta
aatgatgatgacgaggaccagcctcaagggctaactaaagagcagattgacaacctctcc
atgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgcataacagagtat
gcagaaggtaacaagctacgtaagctgccctgctctcatgagtaccatgtgcactgcatc
gatcgctggctgtctgaaaactccacttgtcccatctgccgcagggccgtcctggtgtcg
gccaatcgagagagtgtggtgtag
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