Lates calcarifer (barramundi perch): 108882930
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Entry
108882930 CDS
T04895
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108882930 (gabrb2a)
04082 Neuroactive ligand signaling
108882930 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108882930 (gabrb2a)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108882930 (gabrb2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
108882930
NCBI-ProteinID:
XP_018531241
UniProt:
A0AAJ7LUY5
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Position
LG8:9459661..9490976
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AA seq
526 aa
AA seq
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MGRIRKNHFGILTFSLLVTFVWAQSVKDIKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKMTPDDNILFSTL
EMKNEMGGAGDLSRGLGAPGDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSR
LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaaccactttgggattttgactttttccttactagtgactttt
gtctgggctcaaagcgtcaaggatatcaaagatccgagcaatatgcctctggtaaaagaa
acagtggacagactgatgaaaggatacgacattcggttgaggccagatttcggaggtgcg
ccggtggccgtggggatgaatatagacatagccagcatagacatggtctctgaagtcaat
atggactacactttgacaatgtacttccagcaagcgtggcgggacaagcgtctgtcctac
tctgagatcgcctacaacctgactctggataacagagtggccgatcagctgtgggtcccc
gacacctacttcctcaatgacaagaagtccttcgttcacggagtcacagtcaagaacagg
atgatccgtctccaccctgacgggacagtgctttatggactcaggatcaccaccactgca
gcctgcatgatggacctgcgtcgctaccctctagatgagcaaaactgcaccctggagatc
gaaagctatggctacaccacagacgatatcgagttttactggcgaggtggagacggcgca
gtgtccggggtcgacagaatagagctgcctcagttctctattgtcgactacaaactcatc
tccaagaacgtggtcttctctacaggttcctacccccgcctgtccctcagtttcaaactg
aagaggaacattggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcctgggtctccttctggatcaactacgacgcctcagctgccagagtggccctgggg
atcactacggtgctgaccatgaccaccatcaacacccacttgcgagagacgctccctaag
atcccctacgtgaaggctattgacatgtacctgatgggctgctttgtgtttgtcttcctg
gccctgctggagtacgccttcgtcaactacatcttcttcggccagggcccccagcggcag
aagaaggcggctgagaaagcagccacggccaataacgagaagctgagacccgaccccaac
aagtggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcatta
ggactaggcgagcaaagaaataagatgactcccgatgacaacatcctgttcagcaccttg
gaaatgaagaacgagatgggtggtgccggggatctgtcccggggcctgggagcgcccgga
gacccccgcaacaccatgctggcttacgatagctcgacgctgcagtaccgcagggcagcc
atggcccgccagaactatggccacagcgccttggagcgccacgcccagaagaagtcacgc
ctacggagacgggcctcccagctcaaggtgaacatcccagacctgtccgacgtgaactct
atcgataagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtggtctac
tggctctactacgtccattaa
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