Lates calcarifer (barramundi perch): 108882943
Help
Entry
108882943 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform isoform X1
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04110
Cell cycle
lcf04114
Oocyte meiosis
lcf04136
Autophagy - other
lcf04140
Autophagy - animal
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04350
TGF-beta signaling pathway
lcf04382
Cornified envelope formation
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108882943
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108882943
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108882943
04136 Autophagy - other
108882943
09143 Cell growth and death
04110 Cell cycle
108882943
04114 Oocyte meiosis
108882943
09144 Cellular community - eukaryotes
04530 Tight junction
108882943
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108882943
09158 Development and regeneration
04382 Cornified envelope formation
108882943
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108882943
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108882943
04131 Membrane trafficking [BR:
lcf04131
]
108882943
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882943
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108882943
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108882943
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
108882943
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108882943
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108882943
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108882943
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108882943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108882943
NCBI-ProteinID:
XP_018531259
UniProt:
A0A4W6E5Z7
LinkDB
All DBs
Position
LG8:complement(9541906..9545168)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDKSFTKELDGWIEQLNECKQLTENQVKVLCEKAKEILTKESNVQEVRCPVTVCGDVHG
QFHDLMELFKIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRFRERITILRGNHES
RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDNQIFCLHGGLSPSIDTLEHI
RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
TRRTPDYFL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaagtcattcacgaaggagttggacggatggattgaacaactgaatgagtgc
aaacagctcacagagaatcaggttaaagtcctttgcgaaaaggccaaggagatcctgaca
aaggagtccaacgtgcaggaggtgagatgtccagtgacagtctgtggagatgtccacggt
caatttcatgacctgatggagctgtttaagatcggagggaagtccccagacactaactac
ctcttcatgggagactatgttgacagaggctactattctgtggagacagttacactcctg
gtttctctgaaggtaaggtttcgtgaaagaatcacaattctcagaggaaaccacgagagc
agacagatcacacaagtgtacggcttctatgacgagtgcttgaggaaatatggaaacgcc
aatgtttggaagtacttcacagacctgtttgactatctgcccctcactgcactagtagat
aaccagattttctgcctccatggaggattgtccccttcaatagacacactggaacacatc
agagcgctggatcgcttacaggaggttcctcatgagggtcccatgtgtgacttgttatgg
tcagacccagatgaccgtggtggttggggcatctcaccccgtggtgctggttacaccttc
gggcaggacatttcagagactttcaaccatgcaaacggcctaactttggtctcaagagcc
caccagctggtgatggagggttataattggtgtcacgaccgcaatgtagtgacgatcttc
agcgcaccaaactattgttatcgttgtggaaaccaggcagcaatcatggaacttgatgac
acattgaaatactccttcctacagtttgaccctgcaccacgcagaggagaaccccatgtg
acgcggcgtactccagactatttcttgtaa
DBGET
integrated database retrieval system
