Lates calcarifer (barramundi perch): 108882946
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Entry
108882946 CDS
T04895
Symbol
nsd1a
Name
(RefSeq) histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X4
KO
K15588
[histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:
2.1.1.357
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108882946 (nsd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882946 (nsd1a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108882946 (nsd1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108882946 (nsd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
PHD-1st_NSD
SET
C5HCH
AWS
PHD_NSD
PHD
PHDvar_NSD
PHD_2
Motif
Other DBs
NCBI-GeneID:
108882946
NCBI-ProteinID:
XP_018531263
UniProt:
A0AAJ7PLQ7
LinkDB
All DBs
Position
LG8:9552364..9565739
Genome browser
AA seq
2159 aa
AA seq
DB search
MNQSYRQAVRGSVFGSGQPELRPRNGLVSTSYGNQCGIVKRGSDQPSPVQLPSSSLKQPA
VLGYNQPDRTHCYSPLKRLQDLNTVVNRPDLERDLHPRNHLHCASPISDDDDDEFEAPSV
QLPPSPGNEDMEPFETLQDVNRNGFSPHSPDSLERCSPIPNGYLHFESTLFDSSDIKEEE
EDEEEGDHNSSEDLTPFHHSQKLSQDRTVADSKTTRDAGVDRRTYKPTVFNLMSKTISEL
NPTLSPSALPEITMRDGWSLGEESDSDGELASPVDPGLISPAGTNSNSNSPKKKPLPTVK
YLEGDLVWAKFNRRPWWPCQVTSDPDQGSHTKMKVPSPRPCRMYFLETIGEIVECSWVPG
NVILPFEGGHQFEDLPVLRRRGKQKEKDYKYTIPKSLLTAWKVSVAEAEYLLPGRQRNTE
SVLSVSINGEERVPSPVPTEKPQEPPSPSVDPGRTPSPNMPASENEHHLLKNSTVQSNKS
KASRKKKKCLSDIFGHIVGGSKESSAGTNTTDQFHTTTCALKEEPTDSPYADLDSVPMLH
RPKRTAVSPIQEVDGSVRKEQGSTKAKTKFTEKVNQRTDSCDSILTNKLTSKDTNSEQSL
GSCNERLYSSTEKHSMNLPASSRLMTRALKAEEETDLKDALAASQISTDAHSDDCPNNIP
ANAPIKTEMSPSWESPSNASSSADHSSPKRRARKPDKKLIRNGSLIKSKCAGSSVPTAQP
VKVKTENVVPDVSSSSSPSLSPMDAFQDVKELMFKSLVKEDSSDSELSVFRPDTNYKFST
FLMLLKDMHDIREKEGKPLTVPPSPVLIKEEPLVIPTATGGSCDGFAERIKTENGQLGKS
TTPHSTAVKSKSRTKAIMSADTYHCEDFPGRSQIGGSDKQRRKQRLPAKLKLSIPGLSSD
LADLAYGREFVSGHADLADPRSGPPVIAAANPLSSYLDKNSESMVAPKKRWQVVGESAEN
KGEVMSEAPAGVNGSYATRASPDLDLGVEKQDENDSHFLETSSAAGLPENKRLRKPTKRL
LESTEEYEQIFSPKKKSKKHTSESSKMQISGMTELHDLSTTPGTVTSASSSVDPTEALAE
SDQSPSQDELSPLASSVSPAPTQPPLDTETADETDLPPESDMGLLSQERKRPRKLSHKVL
ECTIEEVSVSSSKKKEQKRHSGVTSEVKVLVKKSQVGSVRREREREKPGPSTSSAPVGTS
QDSVSKDVHGDLTPDRPPSPQGSKTPKQEAETEACSTEEKQDVHTGTLTPKPEVLSVGLN
DSVSSHVDVKGKIGAASLKENVCQVCERTGDLLVCEGHCYGAFHPQCIGLSVAPKGKFLC
RECKTGVHTCFVCKKSGNGVKRCMIPLCGKFYHTDCILAYSATQPHNKGFRCPLHVCLSC
HITNPLNVCSSKGRLARCVRCPVAYHANDNCMAAGSLVLANNSFLCPNHFTPRKGCKNHE
HINVSWCFVCSEGGSLLCCEACPAAFHRECLNMEMPQGSWFCNDCKAGKKPRIKDILWVK
WGRYRWWPAEVCLAKDVPNNILRMKHEVGEFPVQFFGSKDFVWTYQARVFPYMEGDTHNI
EKMGKGADAVYKKALTEAAERFRELQAEKEMRQLQEDRKNDKKPPPYRHIKVNRPIGKVQ
IITADLSEIPRCNCKASDENPCGIDSECINRMLMYECHPQVCAAGERCQNQAFTKRQYTT
VEIFRTLSCGWGLRGVSDIKKGAFVSEYVGEVIDEEECRARIRHAQENDICNFYMLTLDK
DRIIDAGPKGNQARFMNHSCQPNCETQKWTVNGDTRVGLFALQDIPKGVELTFNYNLECL
GNGKTACKCGAPNCSGFLGVRPKNQPPAEKLKLKEGKRKVPMKKKTKQEVTKEREDECFS
CGDGGQIVSCKKPGCPKVYHADCLNLAKRPAGRWECPWHQCDICGKEAASFCEMCPSSYC
KEHREGMLFISKLDGKLSCSEHDPCGPDPLEPGEIREYMPNTTSVRPGGMALPVAPSLLP
DSRRAGSSAAPISSPAGQATLGRPEPPPRLYINTKTATSSFVPSSRCYLTDRTEGKAFST
LTSSKDQREDGEVEDGEVCGLEVEEVEDDDDDDEEADEEEDEMEMEIVEDEEEEEEEEEE
EPLYGGGLLEEDDDEEEEDDDEGGNVYDTWGGYVDEDADDGEVEGEDMEEWGRVEDDGK
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcatacagacaggctgttaggggctcagtgtttggttcaggccagccagag
ctgaggccccgcaatggccttgtgagcacttcctatggaaaccaatgtggcattgtgaag
cgtgggtcagaccaaccgtcacctgtgcaactgccatcctccagtctcaaacagccagct
gtactggggtacaatcagccagaccgaactcactgctacagcccgctgaagaggctgcag
gacctgaacactgtggtcaacaggcctgacctcgagagggacctccacccaaggaaccac
ttgcactgtgcaagcccaatcagtgacgacgatgacgacgagtttgaggcgccgtcggtc
cagctgcccccttccccgggcaatgaggacatggagccctttgagactctgcaggacgtg
aacaggaatggcttctcgcctcacagtcctgacagcttggagcgctgctctcccatccca
aacggctatctgcattttgagtccacgctgtttgacagcagtgacattaaggaggaggag
gaggacgaggaggagggggatcacaacagtagtgaggacctgacgccttttcaccactcc
caaaagttgagtcaggatcgaactgttgcagacagtaagaccacgcgtgatgcaggggtg
gacagaagaacgtacaaacccactgtctttaatctgatgtccaaaactatatctgagctc
aaccctacactaagccccagtgcactgcccgaaatcactatgagagatgggtggagcttg
ggcgaggaatcagacagtgatggtgaacttgcttctcctgttgaccctggacttatttca
cccgctggcaccaactctaattccaacagcccaaagaaaaagcctcttcctacagtgaaa
tacttggagggggacttggtgtgggcaaagttcaacagacggccctggtggccctgccaa
gtcaccagcgatccagaccaggggtcccacactaagatgaaagttcccagtccccgtcct
tgtcggatgtatttcctggagacgatcggggagattgtagaatgttcctgggtcccaggg
aatgtcattctcccttttgaaggaggccatcagtttgaagacttacctgtgcttagacgg
agagggaagcagaaggagaaagactacaagtatacgatacccaaaagcttactgactgcg
tggaaagtcagtgtggcagaagctgagtatctccttcctggtcgacaaaggaatactgaa
agtgtgctttcagtatctatcaacggagaggagcgtgtacccagcccagtccccactgaa
aagccacaggaacccccctccccctctgtggaccctggccgaaccccatcaccaaacatg
cccgccagtgaaaacgagcaccatctcttaaaaaactctacagttcagtccaataagagc
aaagcttccaggaagaaaaagaaatgtttgtcagacatatttggccatatagtcggtgga
tcaaaggaatcctccgctggcacgaatacgacggaccagtttcatacaacaacttgtgca
ctgaaagaagagccaacggactccccttatgctgatctggattcagttccaatgctgcat
cgtcctaaacgcacagcagtgtctccgatacaggaagtagacggatcggtccgaaaagaa
cagggttcaacaaaagctaaaacaaagttcactgaaaaagtgaaccaacgcacagattcc
tgcgatagcattttaacaaataaattgacgtctaaagatacaaattctgaacagagtttg
ggcagctgtaacgaacggttgtacagttcgactgaaaagcactctatgaatctccctgcc
agcagccgtctgatgacgagggctctgaaagcagaggaagagacggatctcaaagatgca
ctggctgcaagccaaatctctacagatgcccacagtgacgattgtcctaataatatacct
gctaatgcacccatcaaaactgaaatgtctcctagctgggaatcccccagcaatgcatcg
tcctctgctgatcacagctctccgaaaaggcgtgcaaggaagcccgataagaaactaatt
cgtaatggctcattgataaagtctaagtgtgcaggctcaagtgttcccactgcgcaacct
gttaaggtcaagacagaaaatgttgtcccagatgtttcatcttcttcttccccatctctg
tctccaatggatgcctttcaggatgtcaaggagctaatgtttaaatctcttgtgaaggag
gacagcagcgactctgagctcagtgtatttcgacctgataccaattataaattcagtacc
ttcctgatgctgcttaaagacatgcatgatatcagagaaaaagagggcaaacccctgact
gtcccgccatcaccagtcctgatcaaagaggaacccttggtcatccctactgctacagga
ggttcctgcgatggattcgctgaaagaatcaaaacggagaatggccagttggggaaatcc
acaacgccccacagcacggcagtgaaaagcaagagcaggaccaaagctatcatgtcagct
gacacctaccactgtgaagactttcctggtcgctctcagatcgggggctcagacaagcag
cgtagaaaacaaagactacctgccaaactgaaactcagcatacctggcctttcttcagac
ctggctgacttggcttatggcagagagtttgttagcggccatgccgacttagcggaccct
aggtctggtcctcctgttatcgccgccgccaatcccctgtccagctacctcgacaagaac
tcggaatccatggtggctccaaagaagcgctggcaggtggtcggagagtctgctgaaaac
aagggtgaggttatgagtgaggcgcctgccggggtgaatgggtcttacgccacgagagca
tcaccagatctcgatctgggagttgagaagcaggatgagaatgattcgcacttcctagag
acaagcagcgcagccggacttccagagaacaaacgtctccggaaaccaactaaaaggctc
ctggagtcaactgaggagtatgaacaaatattttccccaaaaaagaaatcaaagaaacac
acctcagaatcttccaaaatgcagatatcagggatgacagagctccatgatctcagtacc
acaccaggaaccgttacctcagcctcgtcttctgtggatcccaccgaggctctggcagag
tctgatcagagtccgtctcaggatgagctttctcctctggcttcctcagtatccccagcc
ccaacacaacccccccttgacacagagacagcagacgaaactgatctacctcctgaatct
gacatggggttattatctcaagaaagaaagaggccaaggaagctgtcacataaggtgctg
gaatgtaccatagaagaagtgtctgtgtcttcttcaaaaaagaaggagcagaagcgtcac
agtggagttacctcagaggtgaaggtgttagtcaagaaatctcaggttgggtctgtgagg
agagagagagagagagagaagcctggtcccagcacatcctctgcccctgttggtacctcc
caggactcagttagcaaagatgtccacggtgacctcactccagacagacctcccagcccc
caaggatccaagacccccaagcaggaggcagagacggaggcctgcagcactgaggagaaa
caagatgtacacactggaacactaactcccaaacctgaggtgctatctgttggtttgaat
gacagcgtctcttcccatgtggatgtaaaagggaaaataggggctgcatccttaaaggag
aatgtttgtcaggtatgcgagaggacaggagacctgctggtgtgtgaaggccactgttac
ggagcctttcaccctcagtgtattggtctgtctgtggctcccaaggggaaattcctctgt
cgtgaatgcaagactggtgtccacacatgctttgtatgtaagaagtctggtaatggggtg
aagcgctgcatgataccactgtgcgggaagttctaccacaccgactgtatactggcctac
tctgcaacccagcctcataacaaaggtttccgctgccctctgcatgtttgtctgtcctgc
cacatcaccaacccactcaacgtctgcagttctaaaggtcgactggctcggtgcgtgcgc
tgccccgtggcttatcacgccaatgacaactgcatggcagcaggcagcttggtgctggca
aacaacagtttcctctgtccgaaccacttcactccccgcaaaggctgcaagaaccacgaa
cacatcaacgtcagctggtgctttgtctgctctgaagggggcagcctgctgtgctgcgag
gcctgtcctgctgctttccatagggaatgtttgaatatggagatgcctcagggcagctgg
ttctgcaacgactgcaaagctggaaagaagcctcgtattaaggacatactgtgggtcaaa
tggggacgttacaggtggtggcctgcagaagtctgtctcgccaaagatgttccaaacaac
atcttgaggatgaaacatgaggttggagagtttccagtgcagttctttggctccaaagat
tttgtgtggacataccaggccagagtcttcccttacatggagggtgacactcacaacatt
gagaaaatggggaagggtgcagatgctgtgtacaaaaaggccctgactgaagcagcagag
aggttcagagagctccaggcagaaaaggaaatgaggcagcttcaggaggacagaaagaac
gacaagaaacctcctccatacagacacattaaggtaaaccggccaatcgggaaggtgcag
atcatcacggctgacctgtcagagattccacgttgcaactgtaaggcctccgacgagaac
ccctgcggcatcgactcagagtgcattaaccgcatgttgatgtatgagtgccaccctcag
gtgtgtgcggcgggggagagatgtcaaaaccaggccttcacaaagcgccagtacacaacg
gtggagattttcaggacactgtcctgcggctggggtttacgtggcgtgtcagacatcaag
aagggagcctttgtgagtgaatatgtgggagaggtgatagatgaagaagaatgccgagcc
aggatcagacacgcccaggagaacgacatctgtaacttctacatgcttacactggacaag
gaccggatcattgatgccggacccaaagggaaccaggctcgcttcatgaaccacagttgc
cagccaaactgtgagacccagaagtggactgtgaacggggacaccagggtggggctgttt
gctctacaagacatcccaaaaggtgtggagctgactttcaactacaacctggagtgtctt
ggtaatgggaaaactgcctgtaaatgtggagcacccaactgcagtggtttcctcggtgtc
cggccaaagaaccagccgcccgcagagaaactgaaactgaaggagggaaaaaggaaggtc
cccatgaagaagaagaccaagcaggaagtgaccaaggagagagaagacgagtgcttcagc
tgcggtgacgggggacagatagtgtcctgtaagaagccaggctgcccgaaggtctatcac
gccgactgtctcaacctggccaagaggcctgcagggcggtgggagtgtccgtggcaccag
tgtgacatttgtggaaaagaggcggcttcgttctgcgagatgtgtcccagctcttactgt
aaggagcatcgtgaaggcatgctcttcatttccaagctggatggcaaactgtcgtgcagc
gaacatgacccctgtgggcccgacccgttggagccaggggagatccgtgagtacatgccc
aacacgacctctgtgaggcccgggggcatggccttgcccgtcgctccctcgctgctccca
gactccagaagagctggttcctctgccgctcccatctcctcccctgcgggccaggccacg
ctgggcaggccagagccccctccccgcctctacatcaatacaaagactgctacctcgagc
tttgtcccctccagcaggtgttacctcacagacaggactgaggggaaggcgttctccact
cttacctcctccaaggatcagagagaggacggtgaggtggaagacggggaggtgtgcggg
ttggaggtggaggaggtggaagacgacgacgacgatgatgaggaagcagacgaggaagag
gatgaaatggagatggagatagtggaagacgaggaggaggaggaggaggaggaggaggag
gagccgctgtatggaggtggcctgctggaggaagatgacgatgaggaggaggaggacgac
gacgagggagggaatgtgtatgacacctggggtggttatgtggatgaagacgctgatgat
ggagaggtggagggggaggatatggaggagtggggcagagtggaggacgacggtaaatga
DBGET
integrated database retrieval system
