Lates calcarifer (barramundi perch): 108882966
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Entry
108882966 CDS
T04895
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108882966
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108882966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108882966
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108882966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
108882966
NCBI-ProteinID:
XP_018531292
UniProt:
A0A4W6EA06
LinkDB
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Position
LG1:17949425..17956473
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AA seq
454 aa
AA seq
DB search
MNTVFFFFHLVILAGAAWASSDETKLVKTLFTGYNKVVRPVNHFKDPVVVTVGLQLIQLI
SVDEVNQIVSSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGDFA
IVHETKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNPD
SDHPDLSNFMESGEWVMKESRGWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVIIP
CMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHTMPDWVRKVFIETIPNIMFFSTMKRPGKEKQSKSI
YGADFDISDISGNQTSAVPYQSPITKNPDVRSAIEGVKYIAETMKSDEESNNAAEEWKFV
AMVLDHILLCVFMAVCLIGTLGVFAGRLIELSML
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtatttttcttttttcatctagtcattctagcaggtgctgcctgggcctcc
tctgatgagacaaagctggtcaaaactctcttcactggttacaataaggttgtccgtccg
gttaatcacttcaaggacccggtggttgttaccgtaggccttcagctcatccagctcatc
agtgtggatgaggtcaaccagatcgtcagcagcaacgtgagactgaaacagcaatggaaa
gatgtaaacttgcagtggaacccagaggattacggtggcatcaaaaagatcagagttccc
tccactgacatttggcggcctgatctggttctctacaacaatgctgatggcgactttgcc
atcgttcatgaaaccaaagtgctgctggagcacactgggatgatcacatggaacccacct
gcaatcttcaagagctactgtgaaatcattgtgctgcatttcccctttgaccttcagaac
tgcagtatgaagctgggtacctggacctatgatggaaacctggttgtcgtcaatccagac
agtgaccatcctgacctgagtaacttcatggaaagtggagagtgggtgatgaaggagtcc
cgtggctggaagcactgggtgtactatgcctgctgcccagacaccccttacctggacatc
acctaccacttcctcatgctgcggctcccactgtacttcatcgtcaacgtcatcatcccc
tgcatgctcttctccttcctgactggccttgtcttctatcttcccacagattctggtgag
aagatgactctcagcatctccgtcttgctgtctctgactgtgttcctgctggtcatcgtg
gagctgatcccctctacctccagcgcagtgccgcttattgggaagtacatgctcttcacc
atggtctttgtcatcgcctccatcatcatcaccgtcatcgtcatcaacacccaccaccgc
tccccaagcactcacacaatgccagactgggtccgcaaggtttttatcgagaccattccc
aacatcatgttcttttcaacaatgaagcgccctggcaaagaaaagcagtctaaaagcatc
tatggtgctgattttgacatctcagacatttctggtaaccagacctccgctgtcccctac
cagtcacccatcaccaagaatcctgatgtccgcagtgccattgaaggagtcaaatacatt
gcagaaaccatgaaatcagatgaggaatccaacaatgctgctgaggagtggaagtttgtt
gccatggtgttggaccatattctgttgtgtgtcttcatggctgtgtgtctcatcggtact
ttaggcgtgttcgcaggccgtctcattgagctgagcatgctctaa
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