Lates calcarifer (barramundi perch): 108883014
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Entry
108883014 CDS
T04895
Symbol
psma4
Name
(RefSeq) proteasome subunit alpha type-4
KO
K02728
20S proteasome subunit alpha 3 [EC:
3.4.25.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108883014 (psma4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108883014 (psma4)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108883014 (psma4)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
108883014 (psma4)
Peptidases and inhibitors [BR:
lcf01002
]
Threonine peptidases
Family T1: proteasome family
108883014 (psma4)
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
108883014 (psma4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
TRP_N
Motif
Other DBs
NCBI-GeneID:
108883014
NCBI-ProteinID:
XP_018531379
UniProt:
A0A4W6C9Z0
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All DBs
Position
LG10:5385984..5391254
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AA seq
261 aa
AA seq
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MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
YTQFGGKRPFGVSLLYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK
EGEMTLSSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTCIKVLKLKEVEELIKKH
EAEEAKAEKEKKEKEQKEKDK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgatatgattcccgaacaaccatcttctcaccagaagggcgtctgtaccag
gttgagtatgccatggaagccatcgggcacgccggcacctgcctgggaattttagctaac
gatggcgtgctgctggctgctgagaggaggaacatccacaagctgctggatgaggtgttt
ttctcagagaaaatctacaaactgaacgaagacatggcgtgcagtgtggctggaatcaca
tcagacgccaatgtactgaccaacgagctgaggcttatagcacagaggtacctgctgcag
taccaggagccaatcccctgtgagcagctggtcacagccttgtgtgacatcaaacaggcc
tacacccagtttggaggaaagcgtccgtttggagtctcgctgctctacatgggctgggat
aaacattatggcttccagctctaccagagcgacccaagtggaaactacggaggctggaaa
gccacctgcattggaaacaacagtgctgctgctgtctctatgctgaagcaggactacaag
gagggagagatgaccctttcctcagccctcgccctcgctattaaagtcctcaataaaacc
atggacgtcagcaagctgtcagcagagaaagtggagatcgccaccctgactcgcgagaac
ggcaagacctgcatcaaggtgctgaaactgaaggaggtggaggagctgatcaagaagcac
gaagcagaagaggccaaagccgagaaagaaaagaaagagaaggaacagaaagagaaggac
aagtag
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