Lates calcarifer (barramundi perch): 108883022
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Entry
108883022 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: iron-responsive element-binding protein 2
KO
K22416
iron-responsive element-binding protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108883022
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108883022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Tubulin_C
Motif
Other DBs
NCBI-GeneID:
108883022
NCBI-ProteinID:
XP_018531391
UniProt:
A0AAJ7LU54
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All DBs
Position
LG10:complement(5535119..5546263)
Genome browser
AA seq
974 aa
AA seq
DB search
MALTSPVKEHPYSHLIDTLKDGRIKFFNPQKLNDPRYDKLPLSIRILLEAAVRNCDGFYT
KKEDVQNLLDWQQQQNKAEVPFSPARILLQDFTGIPAMVDLAAMRDAVAKHGVDPSLVNP
KCPTDLIVDHSLQIDYSKCAIQNAPNPGGGGDGPNQSQGPSRSTPSRPPSRGGSQCGGQR
GSCSKAACSDPPASPGSASGSVQQIENTPLLCPFHLKPVSETETALKNQEMELIRNKERL
QFFKWCSKAFKNVNVVPPDVGAVHQVNMEYLSRVVQVCDGFIYPDSVVGTDSHTTMINGL
GILGWGVGGIESEAVMLGQPVSLTLPQVVGCKLVGNINPLTTSIDIVLGITKHLRQAGIA
GKFVEFFGPGVSQLSAPDRTTIANMCPEYNATVSFFPVDQVTLKHFKKTNFTQEKLELLE
SYMKAVKLFRSYEDPSEDPEYSEVIEINLSSMVPYVSGPKRPQDRVAVSNMKEDFQSCLD
EKVGFKGFHISKEKQETRIPFLHCGQEYQLAHGSVVIAAVISCTNNCNPSVMLTAGLLAK
KAVEAGLVVKPYIRTSLAPGSGMVTHYLSTSGVLPYFSQLGFEVIGYGCATCVGNTAPLP
EGVVDAIKQGDLVACGVLSGNRHFEGRLCDCVRANYLASPPLVVAYAIAGTVGIDFEKEP
LGVTSEGKEVYLHDIWPSREEVQQIEEDTVISSIFKDLRGRMEKGNTFWNNIDCPDSVLF
PWDHKSTYIRSPCFFSKLSKEVPPPQSIECAHALLFLGDKVTTDHISPAGSIARVSAAAK
YLLSKRLTPREFNSYGARRGNDAVMTRGTFASIKLQNRFIGKSGPKTLHIPSGQTLDVFE
AAERYQRDGIPLIILAGKDYGSGNSRDWVAKGPYLLGVRAVIAESFEKLHKNQLVGMGIM
PLEFLPGQNADSLELSGKERFTIVLPDSLSPRQQLTVKTSQGKSFLVTALFDTDMDVIFF
QHGGLLRYVARTLL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacttccccagtcaaagagcacccatatagtcatctaatcgacacgctgaaa
gatggcaggatcaagttcttcaatccacagaaattaaatgatccaagatatgacaagctg
cctctgtccatccgtatcttactggaggcagcagttcgtaactgtgatggcttttacacg
aaaaaagaagacgtccagaatctcttggactggcagcagcagcagaataaagccgaggtg
ccgttctctccagcgcgaatcctcctccaggacttcactggtattcctgccatggtggac
ctagcagccatgagggatgctgttgccaaacacggcgtggaccccagcctcgtcaaccct
aaatgtcccacagaccttatcgtagaccactcattacagattgattatagcaaatgtgcc
atacagaatgctccaaaccctggtggaggaggggatggcccaaaccagagtcaaggtccc
tctcgttccacaccctccaggcctccgtccagaggaggctcacagtgtggaggccagcgg
ggttcgtgtagtaaagctgcctgcagtgaccctccagcctcccctgggtcggcctccggc
tctgtccagcagatcgagaacacgcccctcctctgccctttccacctgaagccagtgtct
gaaactgaaacagctttgaagaatcaggaaatggaactgatcagaaacaaagagaggctt
cagttctttaagtggtgttccaaagcattcaagaacgtgaacgttgttcctccggatgtt
ggggctgtccaccaggtgaatatggagtatctgtccagagtggtccaggtctgcgatggt
ttcatctaccccgacagtgtggtgggaactgactctcacacaaccatgatcaatggcctg
ggcatcctgggctggggtgttgggggaattgagtcagaggccgtgatgctgggccagccc
gtgtctctgactcttcctcaggtggtgggctgtaaactagtgggcaacatcaacccccta
accacctccatagacatcgtcctcggcatcaccaagcacttgcggcaagctggcatcgct
gggaagtttgtagagttttttggacctggtgtctctcagctatcagcccccgaccgaacc
accatcgccaacatgtgcccagagtacaacgccactgtcagcttcttccccgtagaccaa
gtcacactcaagcactttaaaaagacaaattttacccaggaaaaacttgaattgctggag
tcctacatgaaggctgtaaaacttttccgaagctatgaagacccctcagaggacccagag
tattctgaggtgattgaaatcaacctaagctccatggtgccatatgtgagtggaccgaag
aggcctcaggatagagtagcagtcagcaacatgaaagaagatttccagagttgtcttgat
gagaaggtgggttttaaaggcttccacatctccaaggagaagcaagagacacgcatccct
ttcctgcactgtggtcaggagtaccagctggcccacggctctgtggtcatcgctgctgtc
atcagctgcactaacaactgcaacccatctgtcatgttgactgcaggtctactggccaaa
aaggctgtggaggccgggcttgttgtgaagccttacatccggaccagcctggctcctgga
agtggtatggtcactcactacctcagcaccagtggagtcctgccttactttagccagctg
gggtttgaggtgataggttatggttgtgccacctgtgtaggaaacacagcaccgttacca
gaaggtgtggtggatgcaatcaaacagggggacctggtggcctgcggtgttttatctggc
aacaggcacttcgaaggccgcctatgtgactgtgtgcgtgccaactacctggcttcccct
cccttggttgtggcctatgctattgcgggcactgtgggaatcgactttgagaaagagcct
ttaggtgtgacatcggaggggaaggaggtatatcttcatgatatctggccgtccagggaa
gaggtccaacagattgaggaggacacagtcatctcctccatttttaaagatctcaggggg
aggatggagaaagggaacacattttggaataacattgattgtccagattctgtacttttc
ccctgggatcacaagtccacatatatccgctcgccatgttttttcagcaaattgagtaaa
gaggttcctcctcctcagtcgatagagtgtgctcatgccttactgttccttggggacaaa
gtgaccacggaccacatctcgccagcgggaagcatcgccagggtcagcgctgctgccaag
tacctgctgagcaaacgtctgactccgcgggagttcaactcctatggtgctcgcagaggg
aacgatgcggtgatgaccagaggcacgttcgccagcatcaagctccaaaatcgtttcata
ggcaaatcaggccccaagactttgcacattccttcaggccagacactggatgtctttgag
gcagccgaacgctatcagagagatggcattcccctcatcatcctggcaggcaaagactat
ggctctggaaactccagggactgggtagccaaaggaccatacctgctgggggtacgtgcg
gtcattgctgagagcttcgagaagttgcacaagaaccagctggtgggaatgggcatcatg
ccgctcgagttcctgcccgggcagaatgccgactcgctggagctcagtgggaaggagagg
ttcaccattgtcctgccagacagcttgagtccgaggcagcagctgactgtcaagaccagt
caaggaaagtccttcctcgtcaccgcactgttcgacactgacatggacgttatctttttc
cagcacggagggcttcttagatacgttgctcggactttactgtga
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