KEGG   Lates calcarifer (barramundi perch): 108883034
Entry
108883034         CDS       T04895                                 
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108883034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108883034
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108883034
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme DNA_ligase_A_M CENP-B_dimeris
Other DBs
NCBI-GeneID: 108883034
NCBI-ProteinID: XP_018531406
UniProt: A0A4W6CNV1
LinkDB
Position
LG10:complement(5641669..5649875)
AA seq 373 aa
MDDLTQALSASFAVSKEPNSTAAPHPRLAQYKSKYSVLEQSERRRRFLDLQKSKRLNYVN
HARRLADGDWTGADSDGEEDMEKQEEGEREQDGNAEEEGMEIERRKLPKHYANQLMLSEW
LVDVPSELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGLSEIAKRNP
FRFVSLQSTDCTAESIQKALTSEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVTDIL
GIEVPVGPLTTKPEYASHQLQQILEHKKASSEVRPANRSGGYELEYLSTPSQDSADSLNF
LNQKPIREANMEI
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggatgacctgacccaagccctctcggccagctttgctgtgtccaaggagcccaacagt
acagccgccccccaccctcggctggcccagtacaagagcaagtacagtgtgctggagcag
agtgagcgacggcggcgcttccttgacctgcaaaaaagtaagagactaaactacgtcaac
catgcacgacgtctggctgatggggactggaccggggcagacagcgatggggaggaggac
atggagaaacaggaggagggggaacgggaacaagatggcaacgcagaggaagaggggatg
gagattgagcggaggaagctgccaaaacattatgcaaaccagctcatgctgtcagagtgg
ctggtggatgtgccatcagaactggacactgattggctgatggtggtctgtcctgtgggg
aaaagatctcttatcgttgcctccaagggttccactgcagcgtacactaaaagtggctac
tgtgtgaaccgcttcccctccctgctgcccggtgggaaccgacacaactctgccatggga
aaagactacacaatcctggactgcatttacagtgaagtggatagaacatactacatcctg
gacgtcatgtgctggagaggccacccggtctacgactgcccgaccgagttccgtttctac
tggcttcagtccaaagtccaggagacagacggcctatcagagattgccaaacgcaaccct
ttccggtttgtgagcctccaaagcacagactgcacagcagagtcaattcagaaagccctg
acatctgagtacagcttcagcgtggatggtctcctcttctaccaccggcagacccactac
actcctggcagcacccctctagtgggctggcttcgcccctacatggtcactgacatcctg
ggcatagaggttcccgtaggacccctcaccactaagcctgagtatgccagccaccagctg
caacagatcctggaacacaaaaaagcatcgagtgaagtccgtccggccaacagaagtgga
ggctacgagttagagtacctgtccacgccgagccaggacagcgcggactctctgaacttt
ttgaatcaaaagccaataagggaagcaaacatggaaatctga

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