Lates calcarifer (barramundi perch): 108883096
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Entry
108883096 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108883096
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108883096
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
108883096
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108883096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
Anti-LPS-SCYG
AAA_23
Motif
Other DBs
NCBI-GeneID:
108883096
NCBI-ProteinID:
XP_018531497
UniProt:
A0AAJ7LVK1
LinkDB
All DBs
Position
LG10:7657739..7682048
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AA seq
1887 aa
AA seq
DB search
MYPSPNNPMKTSCNSSSITELLGALCDCSLSGVSWKRRALGGVSRESFRRALKKRAYGAL
LSKLFQDGTKGSASGSSATANTPPRNKVLMICFDLRVAGCREEAERLEEQLGRLPEGASS
GLKEIDAVVELLVHLAGSAPPPPTSFSRDYMRRERPVLRRPQTWGYQSEELQRLEARAWG
LVCGEEWGTLESLFGTQRLMDAPPGTGLLALRTNLETEERFEKETRMTLFGALQHTRTSD
IDIKLDLPPIPSNIDVTGMAIRVPPCLDQSEDEGFQSASNLTPDSQSEPSSIPDIDIWEA
VRTFEPGRRRCWESVGCPPGKRESLYLTEGGRETFDQLYRLWEGEMRVVSTSTPSPVLPL
PLDSQTQLVSDLLNVLIGVASTTFPLNQSVQFDVRPGVCVSGASPESVSRLLGELAQYGT
YYLRLSRFSLQSADKKGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFLFRKVGRQ
LRYLSELCCVDGPLGAGQATFPVGVKLMSYLYNEAQNNCSNENYPVLLSLLKSSCEPYTR
FVSDWVYSGVFRDVYGEFMIQVNEEYLSFRDKHFWIQGYTLISKDVEDCVPIFLRHIAND
VYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRMERIAKHS
AISREEQALRTEQARQELINQVRESAAKTLESIRGRQVSQRLAEEAKKRERFEELKQHLE
QEQEWRSAAKKKQEEDDFSFARELRDREKRLQALEEQLEQRARKELIAQYSRLSEEAARR
ERLAMWRVQRIRLDEARAQFFIHDRQQTQAILEKYPLGQVRPPVEVLPTSLTQFFYALLN
PLHILTINIFSXQECPTQEPSEQQPAETQGSAASSSPPPPDLSSSTLTPLTADPALISDE
IDINDFLPKSPNPDSQQVDMALEEIGSDLTEVCHTAQLVDYDFSAPFSPLEGITGQASVQ
PRPRWGTAVDLSQNHPSFSHIPIGENMSQMQENVPKASPFGQVSKSSFPLGQYTPDEELQ
NTSKASVYSHLSQASEQLVDGNGSTTNDKQEEVAPMAERGILESKVEVKEDESTKEDGVV
ATAPSTTAGQDLDNGDHKEVTSVSDCGGVKSLETNTDGHVSSAHLKVGEMVSDVVAPQPL
LSVHGHSSDAHIKVGQFVSEVTALLPSPNVHGHASDSHIKIGEHVSEVCAPLPSSSVHRH
SSDAHIKVGENVSEVVAPLPTPNIHGHASDAHIKVGELVSDVVAPLLSPNVHGHSSDAHI
KVGENVSEVVAPLPTPSIHGHSSDANIKVGEFVSNISEARPRWSKHGHASDCTLQPGCVV
SGAEPALSPLPGSSYGHSSDSTLGTGCVVSGNEPKPSPLPGSEHGHSSDSNLGTGCVVSK
SEPLPSPLPGSAYGHSSDSALGVGCVVLGTEPQPSALPGSVYGHSSDSSLAVGCVVKSKG
SGYQQKTEDQEDSKGSKSESPGEQLAEGMGSWAASFGLSPGEKSEQEYLLALSTQYQVEH
YEDCYNLMASSPECQLLKQVTRGPWGLPMDPTLRRATDTTAVQLSEMVSLPVLIKHSVTT
PLITHVSLVNKAVVDYFFVELGVERHFEALRHFLLMEDGEFAQSLSDLLFEKMGSGQTPG
ELLTPLVLNSILSKALQYSLHGDTPLAGNFTFALRFLPETFHPHAPDSLNCLELRYKVDW
PLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKRTALVKGAGRSVQFRQLQLYR
HEMQHFVKVIQGYIANQILQVSWSEFTAKLATASDLDAIHRTHADYLNRAIFRGLLTEKA
APVMNIIHSIFSLILKFRAQLIAQPWGSQQGEAVHPSFIAMQQSYNTFKYYSHFLFKVVT
KLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgagccccaataatcccatgaagaccagctgcaacagcagcagcatcactgag
ctgctgggtgccctgtgtgactgcagcctgtctggagtatcatggaaacgcagagccctg
ggaggagtctcaagagaaagtttccgcagagctctcaagaagcgtgcctatggtgccctg
ctgtccaagctatttcaagatggcaccaaagggtcagcctcaggatcgagtgccacagct
aatacaccgcctagaaacaaagttttgatgatatgttttgacttgcgggtggcagggtgc
agagaggaagcagagaggttggaggagcagctggggaggctgccggagggagcatcctct
ggcctgaaggaaatagatgcagtcgtcgagctccttgtgcacctagctggttcagctcct
ccaccccctacctctttcagcagggactacatgagacgagagcggcccgtgctgcggagg
cctcaaacctggggctaccagagcgaggagctgcaaaggctagaggcccgggcatggggg
ctagtgtgtggggaggaatgggggactctggaaagtttgtttggaactcagaggttaatg
gatgcccccccgggcacagggctgctggctctgaggactaacttggaaacagaagaaagg
ttcgagaaagagaccaggatgacactgtttggagcactgcagcacactcgtacttcagac
atagacataaaactggatctgcctcctattcccagtaatattgatgtaactgggatggcc
atcagggtccccccctgtttagatcagtctgaggatgagggcttccagtcagcctccaac
ttaaccccagactctcagtctgaacccagctccattccagacattgatatatgggaggct
gttcgtacttttgagcctggaaggcggcgctgttgggagtctgttggctgcccaccaggg
aaaagggagtctctctatctaacagagggaggcagggagacattcgaccagctctatcgt
ctatgggaaggggagatgagggttgtgagcactagcacaccctctcctgtcctcccacta
cccctggactctcagacacaactcgtatctgacctcctcaatgtcctgattggagtggcg
tccacaaccttccctcttaaccagagtgttcagtttgacgtcaggcctggtgtgtgcgtg
tcaggagcctctccggagagtgtgtctcgtctcttgggggagctggcccagtatggcacc
tactacttgaggctcagccgcttttctctgcagagtgctgacaagaagggcctggtcttc
caggcttttacaggtggtctgaggaagtatctacactactacagagcttgtgttcttagc
actccacccaccctcagcctgttgactattggcttcctctttcgcaaagtgggccgccaa
ctcaggtacctgtcagaactatgctgcgtagatgggcctttgggtgcaggccaggctacc
ttccctgtgggtgttaaactgatgtcctacctgtacaatgaggcacagaataactgcagc
aacgagaactatccggtcctgctgtcactgctgaagagcagctgtgaaccgtatacccgg
tttgtgtctgactgggtgtatagcggtgtgtttcgagatgtttatggagaattcatgatc
caggtcaatgaggagtacctcagtttcagagacaaacacttctggattcaaggctacact
ctgatctcaaaggatgtggaggattgtgttcctatcttcctgagacacatcgccaatgat
gtatatgtctgcggaaagaccatcaacctcctgaagatctgctgcccacagcactacatc
tgctggtcggagctgccggttcctcgcattgctgtcaccttctccctccaggaggtggaa
gagatcgagagggactgtgcagtgtaccgcggacgcatggagaggattgctaagcacagc
gccatcagcagggaggagcaggctctgcgtacggagcaggcacgccaggagctgatcaat
caggtcagagagtcagcagccaaaaccctggagagcatccgcgggcgccaggtgtcacag
cgtctggctgaagaggccaagaagagggagcgtttcgaggaactgaaacagcacctggag
caggagcaagagtggcgaagtgcagccaagaagaagcaggaggaagatgacttcagcttt
gccagagagctgagggacagagagaagagactgcaggccctggaggagcagctggagcag
agagccaggaaggagctcattgctcagtacagccgtctgtcagaggaagcagcccgcaga
gagagactggccatgtggagggtgcagcgaataagacttgacgaagcccgtgctcagttc
ttcatccatgacaggcagcaaactcaggcaatactagagaaatatcccttaggtcaggtg
agacctcctgtggaggtgttgccgacctcactaacccagtttttttatgctctcctaaat
cctttacacattcttactattaatatcttctcttaacaggaatgtcccactcaggagcca
tctgagcaacagccagctgagacccaaggatctgctgcttcatcatcaccaccaccacct
gacctatcttcatccaccctcaccccccttacagcagaccctgccctcatttctgatgaa
attgatatcaatgactttttacctaaatcaccaaatcctgacagtcagcaagtggatatg
gcattggaagaaattgggtctgacctaactgaagtgtgccatacagcacaactagttgac
tatgacttcagtgccccctttagtccacttgagggtatcactggccaagcctcggttcag
ccacggccgcgctggggaactgcagttgacttgagccaaaaccacccctctttctctcac
atccccataggagagaatatgtctcaaatgcaggagaatgtgcccaaagccagccctttt
ggtcaagtttccaaatccagctttcctctaggacagtatacccctgacgaggagctccaa
aatacatctaaagccagtgtttacagtcatctgtcccaagcctcagaacagctagtagat
ggaaatggttcaaccacaaatgacaagcaagaggaagttgcacctatggcagaaaggggg
attttggaaagtaaagtagaggtaaaagaagatgaatctacaaaggaagatggtgtggtt
gctactgccccctccactacagcagggcaagacctggataatggtgaccacaaagaagtg
acaagtgtttctgactgtggtggggtgaagtcgcttgagacaaacactgatggtcatgtc
tccagtgctcacctaaaagttggagagatggtttcagatgttgttgcccctcagccacta
ctcagtgtccatggtcactcctctgatgctcacataaaggttggacagtttgtatcagag
gtgactgctcttcttccatctcctaatgtccatggtcacgcctcagattcccacatcaaa
atcggagagcatgtttcagaagtctgtgctcctctaccttcctccagtgttcaccgtcac
tcatctgacgctcacattaaagttggggaaaatgtttcagaagttgtcgctcctcttcct
actccaaacatccatggtcatgcctcagatgcccacatcaaagttggggagcttgtttca
gatgtagttgcccctctgctgtcccctaatgttcatggtcacagttcagatgctcatatc
aaagttggggaaaatgtttcagaagttgttgcaccactccctactccaagtatccatggt
cactcctctgatgcaaatataaaagtgggtgagtttgtgtccaacatatctgaagcaaga
cctcgttggagtaagcatgggcacgcctcagactgcacgcttcagccaggttgtgtggta
tctggagctgaaccagccttgtcccctttgcctggaagctcttatggtcactcctcagac
tcaacattaggtactggatgtgtagtttcaggaaatgaacccaaaccttctcctctacct
ggcagtgaacacggtcattcctcagactctaatttaggcactggatgtgttgtgtccaaa
agtgaaccgcttccatcaccactaccaggcagcgcctatggccattcttctgattcagcg
ttgggtgtaggttgtgtggtgttggggacagagccacaaccctctgcactaccaggcagt
gtttatggccattcatcagattcttcacttgcagttggatgtgtagtgaagagcaaagga
agtggatatcagcagaaaacagaggaccaggaagatagtaaaggatctaagtcagagagc
cctggtgagcagctggctgagggcatggggtcttgggcagctagctttggtttgtcccct
ggagagaagtctgagcaggaatacctcttggctttgtccactcagtaccaggtggaacac
tacgaagattgctacaacctaatggcttcatcccccgagtgtcagctgctgaagcaggta
actcgaggcccctggggccttcctatggaccccacacttcgcagagcgacagacacaacc
gcagtccaactcagtgagatggtttccctgccagttctgataaaacactctgtcactacc
ccgctcatcacacatgtgtctttggtgaacaaggcagtggtggactacttctttgtggag
cttggagtggaaagacactttgaggctctgcgccacttcctgctgatggaggatggcgag
tttgcacagtccctcagtgatctgctctttgaaaagatgggcagtgggcagactcccggt
gagctactgacccccttggtcctgaactccattctcagtaaggccctgcagtatagctta
cacggggacacccccttggctggcaacttcaccttcgccctccgcttcctcccagagacc
tttcacccacatgcccccgactctctcaactgtctggagctacgctacaaggtggactgg
ccgttgaacatcatcatcacggacagctgcatgaacaagtacaaccgtctgttctcgttc
ctgctacagctcaaacacatggtgtggagccttcgcgacgtctggttccacctcaagaga
acagcactggtcaaaggagcgggtcgctcggtgcagtttcgtcagctgcagctatacaga
catgagatgcagcattttgtcaaggtgatccaggggtacatcgccaaccagatcttgcaa
gtgtcctggagcgaattcacagccaaattggccactgccagcgacctggatgccatccac
cgcacacatgcagactacctcaacagagccatcttcaggggtttgctgacagagaaagca
gctccagtcatgaacatcatccacagcatcttcagcctgatcctcaagtttcgggcccag
ctgatagcacagccctggggcagccagcagggggaggcagtgcaccccagcttcattgct
atgcagcagtcatacaacaccttcaagtattactctcacttccttttcaaagtggtgacc
aagctggttaatcgaggctaccaacctcatctagaggatttcctccttcgcatcaacttc
aacaactactacaaagactcctga
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