KEGG   Lates calcarifer (barramundi perch): 108883111
Entry
108883111         CDS       T04895                                 
Symbol
smek1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108883111 (smek1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108883111 (smek1)
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     108883111 (smek1)
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     108883111 (smek1)
SSDB
Motif
Pfam: PP4R3 WH1 TMEM164 Ran_BP1 IgD_del_linker
Other DBs
NCBI-GeneID: 108883111
NCBI-ProteinID: XP_018531518
LinkDB
Position
LG7_1:complement(9211127..9224133)
AA seq 819 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERFKGTSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDVVDESEEE
RFDDMSSPGLELPPCELNRLEDLAELVASSLPSPLRREKLALAVENEGYIRKLLELFRVC
EDLENREGLHHLYEIIKGIFLLNRTALFEVMFSDECIMDVIGCLEFDPALPQPRRHREFL
TKTARFKEVIPISDPELRQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQDDEKFLTDLFAQLTDEATDDDKRHELVNFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDVQVRGAATDIFSYLVEYNPSMVREFVMQESQQNDDDILLINLIIEH
MICDTDPELGGAVQLMGLLRTLVDPENMLATANKTEKTEFLSFFYKHCMHVLSAPLLANT
TEEKPSKDDFQTSQLLALILELLTFCVEHHTYHIKNYIINKDILRRVLVLTASQHAFLAL
CALRFMRRIIGLKDEFYNRYIMRNFLFEPVIKAFLNNGSRYNLMNSAIIEMFEYVRVEDV
KSLTAHIVENYWKALEDVDYVQTFKGLKLRYEQQRERQDNPKLDSMRSILRNHRFRRDAR
TLEDEEEMWFNTDEDDLEDGEAVVPPSDKMKSEEDLMEPISKFMERKKLKDTEDKEVLGK
SSLSGRQNPSFKLSFSGSTKTSLSSPPSSASLNPGSPGSPGSPGSGARSSPSTTTVTTKG
GLVGLVDYPDDDDEDEEEEDDGESKEEPLPPSKKSKLSS
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgacggacactcgccgacgagtcaaagtctataccctcaatgaggacagacagtgggat
gaccgtgggaccgggcacgtctcctcgggctatgtggagcgattcaaaggcacgtctcta
ctggtgcgagcagagagcgacggttccctactgctggagtccaaaatcaacccaaacaca
gcctaccagaaacaacaggatacactgatagtatggtcagaggctgaaaattatgatctg
gcactcagcttccaagagaaggctggctgtgatgaaatctgggagaaaatatgccaggtg
caggggaaggatccatcagtggacatcacccaggatgtggtggacgagtctgaggaggag
cgctttgatgacatgtcatcgccaggtctggagttaccaccatgtgaactgaaccgcctg
gaggacctggctgagctggtggcctcctcactcccatcgccactgcggcgcgagaaactg
gcactggctgtggagaacgagggctacattcgcaaactgctggaactgttccgcgtgtgt
gaggatttggagaaccgagagggactgcaccacctgtacgaaattattaaaggcatcttc
ctgctcaatcgcactgcactctttgaggttatgttctctgacgagtgcatcatggacgtc
attggctgtctggagtttgacccagcactcccgcagccgcggcggcatcgggagtttctc
actaagacagcccgctttaaggaggtgatccccatctctgatcccgaactgcgtcagaaa
atacaccagacgtatcgggtgcagtacattcaggacatggtgctgcccacgccctctgtt
tttgaggaaaacatgctgtccaccctgcactccttcatcttcttcaacaaggtggagatt
gtgggcatgctgcaggacgatgagaagttcctgacagacctctttgcacagctaacagat
gaggctactgatgacgacaaaagacacgaactggtgaacttcctgaaggaattctgtgca
ttctcacaaacgttacaacctcaaaacagagacgccttcttcaagacattgtcaaacatg
ggcattttacctgcactagaggtcatactgggaatggatgacgttcaggtgcgtggggca
gccacagatatcttctcttatctggtggagtacaacccctccatggtacgagagttcgtc
atgcaggagtctcagcagaatgatgatgacatcctcctgatcaacctgatcatagaacat
atgatctgtgatacagacccagaactaggtggggcggtgcagctaatgggcctgctacgg
actctggtggacccagagaacatgctggctactgcaaataaaacagaaaagaccgagttc
ttgagcttcttctacaagcactgtatgcatgtcctctcagctccactactggccaacacc
acagaggaaaaacctagcaaagatgattttcaaacatcccagttgctggccttgattttg
gagctgcttacattttgtgttgagcaccacacctatcacatcaagaactatatcatcaac
aaagacattctcaggagggtactggtgctcactgcctctcagcatgcgttcctggcacta
tgtgccctgcgcttcatgcggaggatcattggtctgaaggatgaattctataatcgctac
atcatgagaaactttctctttgaacctgtcattaaggccttcctcaacaacggctcacgc
tacaatctcatgaactcagccatcattgagatgtttgagtatgtccgtgtggaggatgtg
aagtctctcacagctcatatagtagagaactactggaaggctctggaagatgtggactat
gtccagacattcaagggcctcaaactgcggtatgaacagcagcgagagaggcaggacaac
cccaaactggatagcatgcgatccattctgaggaatcatcgtttccgtcgtgatgcacgg
acgctggaggatgaagaggagatgtggttcaacacagatgaggatgacctggaggacggt
gaggcagtggttcctccctctgacaagatgaagagtgaggaagacctcatggaacctata
agcaagttcatggagagaaagaaattgaaagacacagaggacaaagaagtattggggaag
tccagcttgtcaggcagacagaaccccagcttcaaactctccttttctggctccactaaa
accagtctatccagccccccttcatctgcctcactgaatccaggctctccgggatcaccg
gggtctccaggctcaggggcacggagctcaccctccaccacaactgtaaccacaaaggga
ggattagtgggactggtggactatcctgatgatgacgatgaggatgaagaggaggaggat
gatggggagagtaaagaggagcctctgccaccttcgaagaagtccaaactgagctcctaa

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