Lates calcarifer (barramundi perch): 108883153
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Entry
108883153 CDS
T04895
Name
(RefSeq) PDZ domain-containing protein 4
KO
K24056
PDZ domain-containing protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108883153
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
108883153
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108883153
NCBI-ProteinID:
XP_018531569
UniProt:
A0A4W6D8V4
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All DBs
Position
LG6:complement(26160770..26188076)
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AA seq
1048 aa
AA seq
DB search
MDRHGNIKVRGRRPSQLPLDRPQNSQEPLHQPGSARKSHRRKGTFVCSGNGTGSSSISSV
AMVAIPGCVDNATQTDISFQNMMTLGRSRGHHHHHHGRGGASSPPPPPPSPPLPHLVGPY
GINEFCVFEYNDPTDYFDVSHHEVDRQDDLEYEEVELYKSSQQEKLGLTVCYRTDDEEDL
GIYVGEVNPNSIAAKNGRIREGDRILQINGVDIQNREEAVAILTREDSINFSLLLARPDI
ENDNPVDPEEDMELTLEGGGFHPNPRASSCSLNSSHLSGYYRLRRGGGGGLACTGGGGGG
REDAGGDVEVEEEEDDEGEDGERGEKEDRDPPVPLPPLLSLAPLLSNSQELDSGVGRTDD
STRYEELSEQDLLGDQTSACNTNTTNTPGSTRKFRPGPSPRPSPRPSPGLGPSPRPIPSP
GNSRGDTTPPSLHLRDLQLSSDSLPGLDWTAGGGTGGAAYSPHHHHHHKHYHHHHHQPPL
TMMMMMPGLTEEECQRYQELLEIKCQYERRNEKQQREAVKNDREGIEAEAKDQDQDQDKE
ADKEGEEEASSSSVVDVNCNETFSEHEMALIDEELRHLEFKCRNILRAQKMQQLRERCLK
AWMMEEETVAAGVDDDNDENDDPHHHELSAINELPERERSDDKDSTSAYNTGGESCRSTP
LVSTEQIPPLHEEEDEGGRRLMSPPPLLPLGHLPPLNSPLTPRRHRRDRERRHSNLSCSF
SPSTYRKYETANGIMANGSSSTPSTPSKFRSLSREAGSSSRRGVADGGRGSRAGGATNRP
TGGSAESSPYFTRRHHSHNKPLERYQSCMTLPSEGLVDPLDRVRDRARAEGEERGMGTGS
SGPASPRSVNSAPCGLEDHHTRASRLGLALPLGLTQSSPTASPQRMEWKVKIRSDGTRYV
AKRPVRDRLLKARAMKIREERSGMTTDDDAASEMKQGRYWSKEERKQQLLRAREYRRRRE
FMMQSRLDYLRGDRDPSSSTGSAEDHQLHPQQDSPSNNILLLSQKKIMKRRNRRILDNWI
TIQELLAHGSRSPDGKKIYNPLLSVTTV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggacagacacgggaacataaaggtcagaggacggagaccctctcagctcccactagac
agaccacaaaactcccaggagcctttgcaccaacccggctcggcccgcaagagtcacagg
aggaaaggtacattcgtgtgcagcggtaacgggacgggcagcagctccatctcctccgtt
gccatggtggccatccccggctgcgtcgacaacgccacgcagacggacatcagcttccag
aacatgatgacgctggggaggagcagaggccatcaccaccaccaccacggccgaggaggc
gcctcctcccctccaccacctcccccttctcctcccctccctcacctcgtgggaccatac
gggatcaacgagttctgtgtgtttgagtacaatgaccccactgactactttgacgtctct
catcatgaggtggaccgacaggatgacctggagtacgaggaggtggagctgtacaagtcc
agtcagcaggagaagctgggtctgacagtctgctacaggacggacgatgaggaggatctg
gggatctatgtcggagaggtgaatccaaacagcattgcagcaaagaatggacgcatcaga
gaaggagaccggatattacagattaatggagtggatattcagaacagagaggaagcagtg
gccattttgaccagagaggacagcatcaacttctccctgctgctggccaggcctgacata
gagaatgacaaccccgttgatccagaggaggacatggagctgactctggaaggaggaggt
ttccatccaaacccccgagcctcctcctgttctctcaactcatctcacctctctggttac
tatcgcctccgccggggaggaggaggaggcctggcctgcactggaggaggaggaggaggt
agagaagatgcagggggtgatgtggaagtggaggaggaagaggatgatgagggagaggat
ggagagagaggagagaaggaggacagagacccacctgtccccctccctcctttgctcagc
ctggctccgctgctgtccaacagccaggagctggacagcggagtgggccggaccgacgac
agcacccgctacgaggagctgtcagaacaagacctgctgggcgaccagaccagtgcctgt
aacaccaacaccaccaacacgccgggcagcaccaggaagttcaggccgggacccagcccc
aggcccagtcccagacccagtccaggcctcggcccaagccccaggccaatccccagccct
gggaacagtcgaggggacacaactcctccttccctccacctgcgagacctccagctcagc
tcagactctctccccggcctggactggacagctggaggaggaacaggaggagcagcgtac
agcccccaccaccatcaccaccacaagcactaccaccaccatcaccaccagccgcctctg
acgatgatgatgatgatgccgggcctgacagaggaggagtgccagcgataccaggagcta
ctggagataaaatgccagtacgagagacgtaatgaaaagcagcaaagagaggcagtgaaa
aacgatcgtgaaggcatcgaagccgaagcaaaagaccaagaccaagaccaagacaaagag
gcggataaggagggtgaagaggaggcttcttcttcctcagtggtggacgtgaactgcaat
gagactttcagtgagcacgagatggcgctcattgacgaggagttacgccacctggagttt
aagtgccgcaatattctccgtgcccagaagatgcagcagctcagagagagatgcctgaaa
gcctggatgatggaggaggagacagtggcagcaggtgtggatgatgacaatgatgaaaat
gacgacccccaccatcacgagttgtcggccatcaacgagctcccagagcgagagcgatcg
gacgacaaagacagcaccagcgcctacaacactggaggggagagctgtcggagcacgccg
ctggtcagcactgagcagatcccgcctctccatgaagaggaggacgaaggaggccgacga
ctgatgtctccgcctcctctcctcccccttggccacctcccccctctgaactcccctctt
accccccgtcgtcacagacgcgacagagagagacgccactcgaacctcagctgctctttc
tccccgagcacttacaggaagtatgaaacagccaatggcatcatggcaaacggctcaagc
tccaccccctcgacaccctccaagttcaggtctctgagcagagaggcggggtcgtcttca
agacgtggtgtggctgatggaggccggggctccagagcaggtggagccaccaacaggccc
acaggtggaagtgcagagtccagtccctatttcaccaggcgacaccacagccacaacaaa
ccgttagagcgataccagagctgtatgaccctgccctctgagggcctggtggaccctctg
gaccgagtgagagacagagcgagggccgagggcgaggagagggggatgggcacgggcagc
agcggcccggccagccccaggagtgtgaacagcgccccctgcggtctggaggaccatcac
acaagagcctcgcggttaggactggccttaccacttgggttgacacagtcatcaccaacc
gcctcaccacaacgcatggagtggaaggtgaagatccgcagtgatgggactcgctacgtg
gccaaacgtccggtcagggaccgtctgctgaaggccagagccatgaagatcagggaggaa
cgcagcggcatgacgactgacgacgatgctgccagcgagatgaaacagggccgatactgg
agcaaagaggagaggaagcagcagctgctgagagccagagagtacagacgaagaagagag
tttatgatgcagagccgcctggactacctcagaggagacagggacccgtcatcatcaaca
gggagcgctgaggaccatcagctgcacccccagcaggactcccccagcaacaacatcctg
ttactgagccagaagaagatcatgaagaggaggaaccggcgcatcctcgacaactggatc
accatccaggagctgctggcacacggctcgaggtcaccagacggaaagaaaatatacaac
cctttgctttctgtgaccacggtgtga
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