Lates calcarifer (barramundi perch): 108883187
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Entry
108883187 CDS
T04895
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
108883187
NCBI-ProteinID:
XP_018531618
UniProt:
A0A4W6C7X7
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Position
LG15:3018205..3160125
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AA seq
1093 aa
AA seq
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MRLMPGSPPPVLPAILALTLAAFLPQLSSGATPFPQDLEPISIVGRESSYLYPSFQGLMS
DNDTVRLGLDFQRMLRINHMLYIAARDHVFAINLDVSSEQIIPRQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMATLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIERAFSGKFKEQRNS
ESAWTPVPEEQVPKPRPGCCAGEGSAAAYKSSTTFPDETLTFIKSYPLMDESVPSVNDRP
YFTRTTSRFKLTQIAVDTSAGPYKNYTVVFLGSDNGHVLKILASTEGANASFSTQLLEDI
DVYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSSCVIRVPLSRCADYSTCKKSCLSSRD
PYCIWLKSGSCATVSPGFKGGFEQDVENGYHQHPDTCHDVLATTRKQNTALDSAYGKTTP
TSASTTYHGAAFPKEAGDPERGTGPDGPPPVGEQGSPDSEPISVEMEGVRRPPELEKTNH
SVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSKDDKLEVSSPKIYNSFFANSKEHHPPRRNGHHGMTMGDLVHPHHHHLHHSSE
LSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNIGSRPSSALLHQQVFPYSH
GLSNGQPLVGGHLHPEERKIHNVERVLSQQPYPGYSQKVMEVTSLDELLKHIHEASGSKN
SQLMSPSGLMASGGGGQLAFANRIQPQIPETESAPYYSSSTLPRDSLTRRMDVPPDIPPH
HQSTLERRHSSQRHSLIAAATKMPNGGGVGGGGGGGGGGMIPRQHSFSQRNGGPHQPPPL
LARMNSTGSACEVHYPLIPSGYLTRQHSYNGEQEVPHRGAIVRRASSLKPDVPPKPLFIP
ATSPVNQQGKFNY
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgatgcccggctcgcctccacctgtcctgccagccatcttggctctcacctta
gccgccttcttacctcagctgtcctcaggagccacgccgttcccccaagacctggaacca
atcagcattgtgggcagagaatcctcctacctctaccccagcttccagggactcatgtcg
gacaatgacactgtccgcctgggcctggacttccagaggatgctgaggatcaaccacatg
ctctacatagctgcccgggaccatgtgttcgccatcaatcttgacgtttcatctgagcag
ataatcccacggcagaaactgacttggaagacgaaggatgtggagaagtgcactgtgaga
gggaaaaacagcgacgaatgttacaactacatcaaagtgctggtgccacgcaatgacgag
acgcttttcgcctgtggcaccaatgcattcaaccccacctgccgtaactataagatggcc
acactggagcaggagggggaggaggtagtgggacaggctcgctgtccctttgagtcccgc
cagtccaacgttggcctctttgcaggtggtgatttctactcagccactatgactgacttc
ttggcaagtgatgcagtcatttacagaagtctgggagaaagtagccctgtcctacgtaca
gtcaagtatgactccaaatggctgcgagagccacatttcctccatgccattgagtatggg
aactacgtgtactttttcttcagcgagatcgcagtggagtacaccactcttggaaaggtg
gttttctccagagttgctcgtgtttgtaagaatgacaacggtggttccccgagagtgctg
gaacgttactggacgtccttcctcaaagcccgactgaactgctctgtcccgggagactct
ttcttctactttgacgtcctgcagtcgctgaccaacgtgctgcagataaaccaccggccg
gcggtgctcggcgtcttcaccacacaggcaaacagtatcaccggctcagcagtctgtgct
ttctacatggacgacatagagagggccttcagtggcaaattcaaagagcagaggaacagt
gagtcagcgtggacacctgttccagaggagcaagtcccgaaaccaaggccgggctgctgc
gctggtgagggctcagcggctgcctacaagtcgtccaccaccttccctgatgaaaccctg
actttcatcaagtcctacccactcatggacgagtcggtcccctcagtcaacgacagaccc
tacttcacccgcaccaccagcagattcaagttgacccagatagcggtggacacgtctgca
gggccttataagaactacacggtggtttttctgggctcagacaacggccatgtgctgaag
atcctggccagcactgagggagccaatgcatccttcagcacacaactcctggaggatatc
gacgtctacaaccctaacaaatgcaatgtgcgaggggaggacaggagggtgctgggtctc
gagttggaccgggatcatcatgcattgttcgtggccttctccagctgtgtgatccgcgtg
ccactcagccgctgcgctgactacagcacctgcaagaaaagctgtctgtcttcacgggac
ccatattgcatttggctcaagtcaggcagctgtgccacggtctcacctggtttcaaaggt
gggtttgaacaggatgtggagaacggctaccatcagcaccctgatacctgccacgatgtc
ctggcgaccactcgcaagcaaaacacagcgctagattcagcgtatggaaagaccacaccc
acaagcgccagcacaacctatcatggggcggcattcccaaaggaggcaggtgaccctgaa
agaggtacaggtcctgatggccctcccccagtgggggaacaagggtcacctgactcggag
ccaatcagtgtggagatggagggtgtgaggcggccaccagagctggagaagaccaatcac
agtgtccattatactctcctgatcgcttgtgttttggtggccttcgtccttggcgccttt
ctctctggcttcctggtctcatgctactgtaaccacacaggccacaagaccaagaagttg
tcaaaagatcccgaggccccaatcccacacgccctgtccctccgcagcctggccaagctc
aatggcctcctggacagccaaagtaaggacgacaagctggaggtgtcctctccaaagatc
tacaattcgttctttgccaacagcaaggagcatcacccacctaggagaaatggccatcat
ggaatgacaatgggagacctggttcacccccaccatcaccaccttcaccattcctcagag
ctctccggtctaccaacaccagactcgaccccagaactgcccatcaagagcatgaaagcc
ttcaagaaccagtgggagaagaaccagaactgcaacaatgccaaagaaccaaagtcccac
aacatcggctccaggcctagctcggccctgcttcaccagcaggtcttcccctactctcat
ggcctgtccaatgggcagccactagttggaggtcacctccatcctgaggaacgcaaaatc
cacaatgttgaacgtgttctatctcagcagccttaccctggttactcacagaaggtgatg
gaggtaacctcactggatgagctcctgaagcacatccatgaggcaagcggcagtaagaac
tcccagttaatgagcccatcaggtctgatggccagtggtggcggaggccagctagccttc
gccaaccgcatccaacctcagatccctgagacagaatcagccccctactacagctcatcc
actttacctcgagacagcctcacccgacgcatggatgttcctcctgacatccccccacac
caccagtccaccttggagaggaggcactcctcccagaggcactcgctgattgctgcagcc
accaagatgcccaatggaggtggagtaggaggaggaggagggggagggggaggaggaatg
atccctcgccagcacagcttcagccaacgaaatggagggccccaccagccgcctccccta
ctggctcggatgaactcgacgggcagcgcctgtgaggtccactaccccctcatccccagt
gggtacctgacacgccagcacagctacaatggagagcaggaggtcccacacaggggcgcc
attgtccgccgggcttcctctctcaaacccgatgtccctcctaagcccctgttcatacct
gccacgtccccagtcaaccaacaggggaagttcaactactga
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