Lates calcarifer (barramundi perch): 108883193
Help
Entry
108883193 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein cleavage-activating protein
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883193
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108883193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
Patched
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
108883193
NCBI-ProteinID:
XP_018531628
UniProt:
A0AAJ7LTE4
LinkDB
All DBs
Position
LG15:complement(3231546..3270906)
Genome browser
AA seq
1321 aa
AA seq
DB search
MPLESVNPGDAFKLGILGSVEKRSLDAPRRTVLRRPVLPNGRELTPPTRMTLREQLREKI
SAAFYRHGLLCASYPVPIILFTSASILTCCYPLLRLPLPGTGPVEFTTGVRDYSVPSHEP
QGDLGERPDWYRGPPVAYIQQVLVKAAVSPWDSSLVPVDVFRSPLGRVFSLLEEIRDHVH
SDSSGIRSLEALCLQVTDLFPGLRRMQSVLPEHGCLLVSPGNYWQNQRELFDSDPDLLKT
IQKHEPKGLHTSATLRDLLFGVPGKYTGVSHYNRKRVVTYTITVVLSSYDARFLGSLRAR
LKQLHPSANCSLREDHMVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTRKIDMVKSKWG
LALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVD
LEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMF
FFTTVLSIDIRRMELADLNRRLPAEAGLPPPKPGPLRTREVPPPPRPSPHTITLQTPAFR
NLRLPKRLRVVYFLARTRLAQRIIMVGTVIWIGILVYTDPAGIRTYLAAQVSEQSPLGDP
GGGGLPPHLGVAPVFRGGDPTSTLSIHPAPDPTPLPENQSQGHHGAARAGSLPQAPPAVP
QITWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPVTVHLSPQEAIETRHPQ
DTRHPPPPIPKVSADLQTDLTLYKVAALGLAAGVLLVLLLFCLYRVLCPRNYGQNGVAHG
RRRRGDLPCDDYGYSPPVSEISPLLLRGHSMDIECLASDGMLLASCCLAGQIRVWDAQTG
DCLTVIPNHGLRRSSSSGCWEQRDGWDSMSGAAEPEGLGSEGCDRSISGDGLSEDEGYPL
RRRTAPARPTLFTDQPDLTPLIDTNFTCQPPSHLSTPPRAGFDFGGLVERAYMEHEPPSP
SAYPSPSSASSSPPSGAQLQRRPSIGDAITPLTQERASTAGTQATADWESSVWAMELRGN
LIAAGRSSGKLELWDAVEGSLRCNNEDGISGITALAFLNNRIVAARLNGSLDFFTVEINK
PLGLLQYRGAPGRGSMPPSPCYSSEDVISLQLTRSIQCAHQKPITVLRAAAGRVVTGSQD
HTVRVYRLEDSCCLFTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVFG
HRGDVTSLVCTTSCVISSGLDDLICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGG
QGCVSFWDLNFGDLLQTVYLGQSSDGQGVRQLLVLENAAIVCDFGSELSLVYVPSVLEKL
D
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgccactggaatctgtaaaccctggagatgcctttaaactgggcattttaggaagtgtt
gaaaaaaggtccctggatgccccgcggcgaactgtcctccgccgcccagtgcttcccaat
ggccgggagttgaccccgcccaccagaatgacgctgcgcgagcagctgagagagaagatc
tcggcggccttctaccgccacgggctgctgtgtgcctcctacccagtacccatcatcctc
ttcacctccgccagcatcctcacctgctgctatccgttattgaggctccccctccctggg
acaggtcctgtggagttcaccacaggggtgcgagactacagcgtcccttcccatgagcct
cagggagacctcggggaacggcccgactggtatcggggtcctccggtggcctacatccag
caggtgttggtgaaggcagccgtgtctccatgggacagcagcctggtaccggtggatgtg
tttcggtcgccactgggtcgagtcttcagcctgctggaggagatccgtgaccacgtccac
tctgacagttccgggattcgcagtctggaggcgttatgtcttcaggtgacagacctgttt
ccagggttacggcggatgcagtcagtgcttccagagcatggctgcctgctcgtttctccc
ggcaactactggcagaaccaacgggagctcttcgactcggaccccgacctcctcaagacc
atccagaaacatgaacccaaaggcctgcacacctcggccacactgcgagacctgctgttt
ggcgtccccggaaagtatacaggggtcagtcattataacaggaaaagggttgtgacatac
acaatcactgtagtgttgtctagctacgatgcaaggttcctgggcagcctacgggcgcgt
ctgaagcagctccacccgtcagctaactgcagcctgagagaggaccacatggttcacgtc
cacttcaaggaggagattggcattgctgagctcatcccccttgtcaccacatacatcatc
ctgtttgcctacatctacttctccacacgtaagattgacatggtgaagtctaagtggggc
ctggctctggctgctgtggtcacagtcctcagctctctgctcatgtctgtgggactgtgc
acactgtttggactgacacccacactcaacggaggggagatttttccttacctggtggtg
gtgatcggcctggagaatgtcttggtcctcacaaagtctgtggtctccacacctgttgac
ctcgaggtcaaactccgcattgctcagggccttagtaatgagagctggtctatcatgaag
aacatggccactgagctgtgcatcatcctcattggatattttactctggtgccagccatc
caggagttctgtttgtttgctgttgttgggctggtgtctgacttcttcctgcagatgttc
ttcttcaccacagtactatctatagacatccgccgcatggagctggctgacttgaaccgc
cgcctgccggctgaagcggggctgcctccgccgaagccaggcccactgcgcacacgcgag
gtcccccctccaccacgaccctccccccacacaatcaccctccaaaccccagcattcagg
aaccttaggctccccaagaggctgcgtgtggtgtacttcctggcccgtacacgcctggct
cagcgaatcatcatggttggcactgtgatttggatcggcatcctcgtctataccgaccca
gccgggatccgcacctacctggctgcccaggtatctgagcaaagccctctaggagatcct
ggaggaggtggcctgcctcctcacctgggagtggcccctgtcttccgtggtggagatccc
accagcaccctcagtatccaccctgcaccagatccaactcctttacctgagaaccaatcg
cagggccaccacggcgcagccagagcagggtccctcccacaggccccacctgcggtgcct
cagatcacctggggggcagaggacgaggagggctggaggagactgtccttcaggcactgg
ccatcactctttagctactacaacatcactttagccaagaggtacatcagcatcctgcca
gtcattcctgtcaccgttcacctgagccctcaagaggccatcgaaacacgtcaccctcag
gatacaagacatcctccaccacccattcccaaagtctctgcagatctacagactgacctc
accctttacaaggtggcagctctgggcctggcagcgggtgtcctgctggttctactgctc
ttctgtctctaccgggttctctgcccacgtaactatggacaaaatggtgtagcccacggg
cgccggcgccgaggggacctgccctgcgatgattatggctactctccgcctgtcagtgag
atctcaccactgctgttgagaggccacagtatggatatcgagtgtttggccagtgacggg
atgctgctagctagctgctgtctggctggacagattcgtgtttgggatgcccagactggg
gactgtctgactgtcatcccaaaccacgggctgaggcggagcagcagcagtggctgctgg
gagcagcgggatggctgggacagcatgagtggagctgcagagccagagggtttaggctct
gaaggttgcgaccgctccatcagtggtgatggcctgtcagaggatgagggttacccgctg
agacgccgcactgctcctgcacggccgactctattcaccgaccagcctgatcttacccca
ctcattgacaccaacttcacctgccagccaccctcccacctctccaccccacccagggca
gggtttgactttggaggcctggtggagcgcgcctacatggagcatgagcccccctcgccc
tctgcctacccatctccctcctcagcctcatcctcgccaccctcaggagctcaactccag
agaagacccagcataggggatgcaatcacacctttaacccaggagagggcctccacagca
gggacgcaggcgacggcagactgggaaagctctgtctgggcaatggagctgagaggaaat
ctgatagctgctgggaggagcagtggtaaactggagctgtgggatgctgtggaggggtcg
ttacgctgcaataatgaagatggcatctcggggatcacagctctagccttcctcaacaac
agaatcgtagcggctcgactgaatgggtctctagatttcttcactgttgagataaacaaa
cctctgggtctgctacagtacagaggtgcccctgggcggggcagcatgcctccatctccc
tgttacagcagtgaggatgtgatcagcctccagctcacacgctcaatacagtgtgctcac
cagaagccgatcacggtgctgcgagcagccgctggaagggttgtcaccggcagccaggac
cacacagtgcgggtttatcgtctggaggactcgtgctgcctcttcaccctgcagggtcac
tctggaggaatcacagccatctacatcgaccagacgatggttctggcgagcggtgggcag
gacggtgccatctgcctgtgggacgtcctgacagggagccgggtcagccatgtttttggt
caccgtggtgacgtcacatcactggtctgcaccacctcttgtgtcatcagttcagggctg
gatgacctcatctgtatctgggaccgcagcactgggatcaagctctactccatacagcag
gaggtgggatgcggggccagtctgggagtgatctccgagtctctcctggtgacagggggc
cagggctgcgtctccttctgggacctgaatttcggggacctgctacagacagtctatctg
ggccagagcagtgatggccagggcgtccggcagctgctggtgctcgagaacgccgccatc
gtctgcgacttcggcagtgagctcagcctggtgtacgtgccctctgtgctggagaaacta
gactga
DBGET
integrated database retrieval system
