Lates calcarifer (barramundi perch): 108883254
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Entry
108883254 CDS
T04895
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883254
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108883254
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
108883254
NCBI-ProteinID:
XP_018531699
UniProt:
A0A4W6FJ47
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Position
LG4:complement(17086051..17088490)
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AA seq
248 aa
AA seq
DB search
MAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKSLLKRDRFVFPLPSLLGEAAEHLKGFSMDSFLVPGD
KARALLAPASSSSSSSSSTSSFSLLEPVAQFSTGAVQRMAEIPHTLAAGALPYGAHAFGY
QTGGIGGLACHGQHTHTHPSPSSPGYVVPCNCSAWSAASLQPQVAYILFPGGMTKSGMDS
YTSPSSSV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctttagatcatatcaagagacccatgaacgccttcatggtttggtccaga
ggccagaggagaaagatggcccaggagaacccgaagatgcacaactctgagatcagcaag
agactcggcgcggagtggaagctgctctccgactctgagaagcgcccgtacatcgacgag
gccaagaggctgcgggctcagcacatgaaggagcacccggactacaagtaccgaccccgg
cgcaaacccaagagcctcctgaagagggaccgttttgttttcccgctgccgtctctgctc
ggggaggcagcggagcacttgaagggattttccatggactcctttctcgtccccggggat
aaagccagggctctcctcgctcccgcctcctcctcctcctcttcttcctcctccacatcg
tccttctctctgctggagccggtggcgcagttcagcaccggagctgtccagcggatggcg
gagattccgcacactctggccgcgggcgctctgccttacggcgcgcacgcctttgggtac
cagaccggagggatcggaggtctggcttgccacggacagcacacccacacccacccgtca
ccctccagccccgggtacgtggtgccgtgtaactgtagcgcgtggtctgcggccagttta
cagcctcaggtggcatatattctcttccctggagggatgaccaagagcggcatggactct
tacacttcacccagctccagtgtgtga
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integrated database retrieval system
