Lates calcarifer (barramundi perch): 108883266
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Entry
108883266 CDS
T04895
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
KO
K06560
mannose receptor, C type
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108883266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883266
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108883266
04090 CD molecules [BR:
lcf04090
]
108883266
04091 Lectins [BR:
lcf04091
]
108883266
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
C-lectin receptors
108883266
Pattern recognition receptors [BR:
lcf04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
108883266
CD molecules [BR:
lcf04090
]
Proteins
108883266
Lectins [BR:
lcf04091
]
C-Type lectins
Others
108883266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Chordopox_A33R
UL45
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
108883266
NCBI-ProteinID:
XP_018531718
UniProt:
A0AAJ7LTF6
LinkDB
All DBs
Position
LG4:8193327..8208761
Genome browser
AA seq
1455 aa
AA seq
DB search
MRNFRKMQTIKITWAAFVLLIQTLQCLASDDSSFELTNKATGFCLVNTHGFCTSVRWTTG
DRLMVDFWNVYKCLGAQGKSVGSGVTLYDCDEKSELQKWECRNGTLLALKGQELYIEITT
DNTAVLSRTTGPNNHLTIQGTSVGACTRTYREFYTIGGNAHGRTCMFPFLYKDKWYEDCT
TFDSSTARPWCAVETKFEHELWGYCPTNSKEHWKKHITTGVYYQLNIQSALTWTEAEASC
KQQSASLLSITDPHEQAYVSALLAAEGRGQGDKLWSGLAMDQEHGWQWSNGQPYRYLNWD
SGHPLGKPGHSCGIIDGDVQYSWQSSTCTKKLGYICNSDGTVAPPTEAAETGFCSAPWIP
YNGHCFHLNRTKKTWSDAQRACHMEGGDLVSIRNVEDQGFVISQLGYGSTDELWIGLNDR
RTEKLFDWSDHSTVSFTSWAYGEPSLSADAEDCVLINGENGNWADRVCNEKHGFICMKTS
ASEPSGGEVDQNVGCKTGWKRHGSYCYFVGTATKTFDEAKEDCKSSDSYLADVSTGVDNA
FLVSLVGLRPEKYFWIGLSNQRDIDQFVWTNTDTVRFTHWNTGMPGHNQGCVAMTTGILA
GLWDVLPCTNREKYICKHQAEGAVLTPAPPTVSPPKCADGWTELGSRHYCYKFFQESSSK
KRTWYEARDYCRAIGGDLLSIHSAVEQRMLPDRYGTAWIGLSAPDPVTGYVWSDRSPVNF
QHWSSGEPNNQNNAESCAEFIGHKRDWSGSWNDEQCEKYNGWLCQIRAGKTPKPPPDPVK
PNYNETSDGWLEWNGNQYYINTRRMAMEAARHFCKQKHGDLVTIDSDAESVFLWKQISKL
YGSFWIGLTVDLDGSFSWMDGSQVVFQKWYEGQPDFKNYDENCVVMEQYTGFWHDYNCGF
EHRSICKRNGSPPANTTVAPTVPPKGGCLPHWKKINSKCYSIINNQKLTWDGARKQCQGM
GGNLASIPSRHVNAFLTSEMAAAPTTDLWIGLHSFHQGKFLWTDGRQRSYVNMDFKQMLL
RGYRPMHFRRFREHFSFYDHLQEDKCVVINTNPLLGIGKWIPKSCNDTNGFICLRNVDPA
FPDSPEPTVPTNYVKMVNDSIKVVTQPMTWNDAKKYCEHDSANLASLRNDWSQVYIELMA
LNLKAPLWIGLNKVQTNGYFRFIDGWQMRFTRWGRNEPSRDRPCVYVDNDGKWKTAYCNE
TMNSVCMKSTDVPPTESSLYPGICPEDPSSLSPNQNYFWQPFKGYCYIFFTEELRWSDAA
ASCARHGGSLASIEDPSEQEFIESNVGIYKDSHSSFWLGLYKSHKEEWLWLDRTVMDYTN
WEEGEPDSETHGAITTSDGKWKTGTYWYRKPYICKTAKVLPPTPSPSVKVGISHHQRSYI
IVAVVLTIAGITVVAMIALFLLNKSGRHLPIPDKLTTFDNPLFFSNEQSPPDVVDTGNST
GMNAEEENPEPVKTM
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattttagaaaaatgcaaacaattaagataacttgggcagcctttgtgctcctc
atccaaacattacaatgtttggcttcagatgattcatcatttgaactaactaacaaggcc
actggtttttgtttggttaatacacatggtttctgcacttctgttcgctggacaactggt
gaccgacttatggttgacttctggaatgtgtacaagtgcctgggagcccaggggaagagt
gtgggaagtggagtgaccctctacgactgtgacgaaaagagcgaactccaaaagtgggaa
tgcaggaatggaacgctgctcgctctcaaaggccaagagctctacattgaaatcactaca
gataacacggccgttctctccagaacaacagggcccaataaccacctcacaattcaaggg
acgtctgttggtgcttgcacaagaacatacagagaattttacaccatcggaggaaatgca
cacggtcgaacctgcatgtttcccttcttgtacaaagacaagtggtacgaagactgcact
acgtttgattcctcaacagcgcgtccatggtgtgcagttgaaacaaaattcgaacatgaa
ctctggggctactgcccaactaactccaaagaacactggaagaaacacatcacaacagga
gtatattaccaactcaacatacaatcagctctgacttggacagaggctgaagccagctgc
aaacagcagagcgcctcactgctcagcatcaccgatcctcacgagcaggcttatgtgtca
gcactattagcagcagagggaaggggacagggggacaagctttggtctggactggccatg
gatcaagaacatggctggcagtggtctaacgggcagccttaccgttatctgaattgggac
tcaggacatccacttggtaaacctggacacagctgtggaataattgatggtgatgtgcag
tactcctggcaaagttcaacatgcaccaagaaactgggctacatctgcaacagtgacgga
actgtggctcctcccactgaagctgctgagacaggattttgctcagcaccttggattccc
tacaatggccactgcttccaccttaatcgcaccaagaaaacatggtctgatgctcagaga
gcctgccacatggaaggaggggacctagtcagcatccgcaatgtggaggaccagggcttt
gtcatctctcaactgggatatggatccactgatgagctttggattggtctgaatgacagg
aggacagagaagctgtttgattggagtgaccactctactgtcagcttcactagctgggca
tatggggaaccatctctatccgctgatgcagaagactgtgttctcattaatggagagaat
gggaactgggctgaccgtgtatgtaacgagaaacatggcttcatttgtatgaagacgagc
gcctctgaaccttctggaggagaagtggatcagaacgtaggctgcaaaacgggttggaaa
agacatggctcatactgctactttgtggggacagcgacaaagacgtttgatgaagctaaa
gaggactgcaagagttcagactcctacttggcagatgtttcaacgggggtggataatgca
ttccttgtcagcctggtgggcttgaggccagagaaatacttctggatcgggctctcaaac
cagagagacattgatcagtttgtgtggaccaacacagacacagtgaggtttactcactgg
aacactggaatgccaggtcacaatcagggctgcgttgccatgacaacggggattttggct
ggcctctgggatgtgttgccctgcaccaatagagagaaatacatctgcaaacaccaggca
gagggggcagttttaacccctgccccaccaactgtttcccctcccaaatgtgcggatggc
tggactgaactgggatcaagacactactgctataagttctttcaagagtcatcctcaaag
aagaggacctggtatgaggccagagattactgcagggccatcggaggagacctcctaagc
atccacagcgcagttgagcaacgaatgctaccagatcgctatgggacagcctggattgga
cttagtgcccctgacccagtcactggttacgtatggagcgatagatccccagtaaatttc
caacactggagcagtggagagccaaacaaccaaaataatgcagaatcttgtgctgaattc
attggccataagagggactggagcgggtcttggaacgatgaacaatgtgagaaatacaat
ggatggctttgtcagatccgtgcaggaaagacaccaaagccgcctccagaccctgtcaaa
cctaactacaatgagacctcagatgggtggctggaatggaatggaaatcagtattatatt
aatacaagacggatggccatggaagcagctcgtcacttctgcaaacagaagcatggtgac
ttggtgactatcgacagtgatgctgaaagtgtctttttatggaaacagatatccaaactt
tatgggtctttctggataggcctgactgtggatcttgatggatcattttcgtggatggat
ggttctcaagtggtgtttcaaaagtggtatgaaggtcagcctgatttcaagaattatgat
gagaactgtgttgtcatggagcaatatactgggttctggcatgattataactgtggcttc
gagcaccggtcaatttgtaaacgtaatggctcaccacctgccaacaccactgtagcacca
acagttccccccaaaggtggctgcctaccacactggaaaaaaattaactccaagtgttac
tccatcataaacaaccagaaattaacatgggatggagcaaggaaacaatgccaaggaatg
ggtggaaacttggcttctattccttccagacatgtgaatgcatttttgacatctgagatg
gctgccgcgccaactacagacctatggattggtttgcatagtttccatcaaggtaaattt
ttatggactgatgggcgacaaaggtcatatgtcaacatggatttcaagcagatgcttttg
cgagggtacaggcctatgcatttcagaaggtttcgagagcattttagcttctacgatcat
ttgcaagaggacaaatgtgttgtgatcaacaccaatcctctccttggtattggtaaatgg
atacctaagtcctgcaatgacaccaatggatttatctgtcttcgaaatgttgatccagct
ttcccagactcccctgaaccaacagttcctaccaactatgtcaaaatggttaatgactcc
atcaaggttgttactcagccaatgacctggaatgatgccaagaagtactgtgaacatgat
agtgccaacctggctagcctgcgaaatgactggtcacaggtctacattgagctgatggct
ttgaatctcaaagctcctctgtggattggactgaacaaagtgcagaccaatggctacttc
agatttattgatggatggcaaatgagatttacgcgctggggtcgaaatgaaccaagcaga
gaccgaccttgtgtctacgtagataatgatggaaaatggaagactgcttactgcaacgag
accatgaacagtgtttgtatgaagtctacagatgtgccaccgacagagtcaagtctttat
ccaggaatttgccctgaagacccaagttcattgagcccaaatcagaattatttctggcaa
ccatttaagggttattgctacatatttttcacagaggaactacggtggtcagatgcagct
gctagctgtgcacgacatggtgggtcattagccagcattgaagatccctctgagcaggaa
ttcattgaaagtaatgtgggaatatataaagacagccactcttctttctggctcggcttg
tataaaagtcacaaagaggagtggttgtggttggacagaacagtcatggactacactaac
tgggaggaaggtgaacctgattctgagacccatggagcaattactacatcagatggaaaa
tggaagacaggcacatattggtatcgtaaaccctacatctgcaaaacagccaaagtatta
ccaccaacaccatcaccatcagtcaaagttgggattagtcatcatcaacgtagctacata
attgtggcagttgtgctgaccatcgctgggatcaccgtggtggcaatgattgccctcttt
ctcctcaacaagtctggtcggcacttacccatccctgacaaattaaccacctttgacaac
ccactcttcttcagcaatgagcagtccccccctgatgtggttgacacaggtaattccact
ggtatgaatgcagaggaagagaaccctgagcctgttaagactatgtga
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integrated database retrieval system
