KEGG   Lates calcarifer (barramundi perch): 108883282
Entry
108883282         CDS       T04895                                 
Symbol
chmp5a
Name
(RefSeq) charged multivesicular body protein 5
  KO
K12198  charged multivesicular body protein 5
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
lcf04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108883282 (chmp5a)
  09143 Cell growth and death
   04217 Necroptosis
    108883282 (chmp5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108883282 (chmp5a)
Membrane trafficking [BR:lcf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108883282 (chmp5a)
SSDB
Motif
Pfam: Snf7 Prefoldin_2 NPV_P10 Hydantoinase_B Big_3_3 Alpha-E Histone_HNS_N DUF1319 DUF948 TBCC_N FliJ DUF848
Other DBs
NCBI-GeneID: 108883282
NCBI-ProteinID: XP_018531745
UniProt: A0A4W6F4C6
LinkDB
Position
LG4:complement(8542399..8546976)
AA seq 220 aa
MNRIFGRGKPKAPPPNLSDCIGNVDARAESIEKKIGRLDAELLKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQREQLAQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAY
KDVKLDQIDDLQDQLEDMMEDANEVQEALSRSYGTPEIDEDDLEAELDALGDELLLDDDS
SYLDEASAAPSIPEGIPSDSKTNKDGVLVDEFGLPQIPAT
NT seq 663 nt   +upstreamnt  +downstreamnt
atgaacagaatattcggacgcgggaagcccaaagcgcctcctccgaatctgtcggactgt
attggaaatgtggacgccagggcagagtccatcgagaagaagattggcagactagatgct
gaactgttgaagtacaaggatcaaatgaagaagatgagagatgggccctcgaagaacatg
gtgaaacagaaggcgatgagagtgctgaaacagaagaggatgtatgaaggtcaaagggag
cagctggctcagcagtcttttaacatggagcaggcaaactacaccatccagacattgaag
gacaccaaaacaacagtggaagccatgaagatcggtgcaaaggaaatgaagaaggcttac
aaggacgtcaaactggatcagattgacgatttacaggaccaactggaggacatgatggaa
gacgccaacgaggtgcaagaggccctgagccgcagctacggcactccagagatagatgag
gacgatctggaagcagagctggacgctctgggtgatgagctgctgctggatgatgacagc
tcctaccttgatgaggcctcagcagccccgtcgatccctgagggaatacctagtgacagc
aaaacaaacaaggatggtgttctggtggatgagttcggcctcccacagattcccgccaca
taa

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