Lates calcarifer (barramundi perch): 108883285
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Entry
108883285 CDS
T04895
Name
(RefSeq) transcription elongation factor A protein 1 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108883285
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108883285
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DBD_Tnp_Mut
Motif
Other DBs
NCBI-GeneID:
108883285
NCBI-ProteinID:
XP_018531749
UniProt:
A0A4W6F5L0
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Position
LG4:complement(8600810..8606393)
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AA seq
311 aa
AA seq
DB search
MGKKEEEEIIRIAKKMDKMAQKKNGAGALDLLKELRSVPMTLELLQSTRIGMSVNAIRKQ
STDEEVTSLAKSLIKSWKKLLDEPGGGEKPSDEKRKEQTTPVVSPSQGSPEAKEESSSSS
NSSSKSEPTEVAPNTLINTFPRAPSTSDSIRLKCREMLANALQTGDDYIAIGADCEELGA
QIEECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMTAEEMAS
DELKEMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKSCTYTQVQTRSADEPMTTFVF
CNECGNRWKFC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaaggaggaagaggagatcataagaattgcgaagaagatggataaaatggcg
cagaagaagaacggggccggggctttggacttactgaaggagctgcgcagcgtccccatg
actctggagctgcttcagtcgaccagaattgggatgtctgttaacgccatccgcaagcag
agcacagacgaggaggtgacgtccctagccaagtccttgatcaaatcatggaagaagctt
ttggatgagcctggaggtggagagaaaccttcagatgagaagaggaaagagcaaacgaca
cctgttgtttcaccttcacagggaagcccggaggcaaaagaagaaagcagctccagcagt
aactctagcagcaagagcgagcccaccgaagtcgcacccaacacgttaatcaacaccttt
cctcgtgcccccagcacctctgattctatcaggctcaagtgcagagagatgctggccaat
gctctgcagactggagatgattatattgctattggtgctgattgtgaggaacttggagca
caaatcgaagaatgcatcttccaagagtttaagaacacagacatgaaatacaagaaccgt
gtacggagccggatctcgaatctaaaggatatgaagaaccctaatttaaggaggactgtg
ttatgcgggagtgtaacccctgagcgaatggcgaagatgactgcagaggaaatggccagt
gatgagctgaaggaaatgaggaagaatttgaccaaagaggctgtcagggaccatcagatg
gccaccactggaggcactcagactgatctattcacctgtggcaagtgcaagggcaagagc
tgcacatacacacaggttcaaactcgcagtgctgatgagcctatgaccacgtttgtcttc
tgcaatgaatgcggaaatagatggaagttctgctga
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