Lates calcarifer (barramundi perch): 108883289
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Entry
108883289 CDS
T04895
Symbol
pde1cb
Name
(RefSeq) dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X1
KO
K13755
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase [EC:
3.1.4.17
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00230
Purine metabolism
lcf01100
Metabolic pathways
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
108883289 (pde1cb)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108883289 (pde1cb)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.17 3',5'-cyclic-nucleotide phosphodiesterase
108883289 (pde1cb)
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Motif
Pfam:
PDEase_I
PDEase_I_N
LIN13_N
Motif
Other DBs
NCBI-GeneID:
108883289
NCBI-ProteinID:
XP_018531758
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Position
LG4:8632856..8720456
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AA seq
749 aa
AA seq
DB search
MGSVTSALTRTRNALVKVGSQPENHDPERSQSAPESDRTRKKNTRFNVSIQTGRQSSRQS
LSEVLSRQDSDGAKQTSRKKTSEGPQSVANEDGESSTRPHASFSRSKSQSALWNAITAGM
GIKGKEQKAPLNDPRSPEEILADDLPAADEPDATEKTAIRLRCLVKQLERGEASLADLKK
NLEYAASVLESVYIEETRRLVDTEDELSDIQSESVPSEVRDWLASTFTRQMGLMLRRNEE
KPRFRSIVHAVQAGIFVERMYRRTSNMVGLSYPPSVISVLKNVDRWSFDVFALNEASGEH
ALKFIFYELLTRYDLISRFKIPISAVVSFVEALEVGYSKHKNPYHNLIHAADVTQTVHYL
LLKTGMVHWLTELEIFAMIFAAAVHDYEHTGTTNNFHIQTRSDTAILYNDRSVLESHHVS
AAYRLLQDDDEMNILYNLSKDDWRELRALVVEMVLATDMSCHFQQVKAMKNFLQQPEGID
KPKALSLLLHTADISHPAKSWDLHHRWTTSLLEEFFRQGDKEAELGLPFSPLCDRKSTMV
AQSQIGFIDFIVVPTFTVLTDMMERIVTPLIDEASHSGFAGFRRSSLNSISSDEAKRHSV
KSVGSDSSSSGQSSLLTVDMKNFKALWNEEVYQNRERWKAQAAKEAEERAKREAEEKAQQ
EETMEPQEVHTESEQPEPKEDKLEGEAPESAEVSRPPDGNTGETEQGGQPRSATHKNPPL
HNGELSEGAESPEGEENKNKGVDAEVAME
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtgacttctgctctgacaaggacgagaaacgcgttggtgaaagtgggttca
cagccggagaaccatgacccggagaggagccagtccgccccggagtcggaccggaccagg
aaaaaaaacactcggtttaacgtttccatccaaaccggacggcagagttcccgccagtcg
ctgtccgaggtcctgagtcgtcaagactccgacggagccaaacaaacttcgaggaaaaag
acttctgaaggtccacagagcgtggcaaatgaagatggagagagctctaccagaccacat
gccagtttttcacgctcaaagtcccagagtgctttgtggaatgccatcacagcggggatg
gggatcaaaggcaaagagcagaaggcccccctgaatgacccacgaagtcctgaggagatt
ctggctgacgatcttcctgcagcagatgaaccagacgccacagagaaaacagccatcaga
ttaagatgtctggtgaagcagttggagagaggagaggcttccctcgctgaccttaagaag
aaccttgagtatgctgcgtcggtgctggaatccgtttacatcgaagagacacgacgtttg
gtggacacagaggatgagctcagtgacatccagtcagagtcagtgccctcagaggtgcgg
gactggctggcctccaccttcacccgccagatgggcctgatgctgcgacgcaatgaggaa
aaacctcgcttccgcagcatcgtccacgccgttcaggctggcatatttgttgagaggatg
taccgacgtacctccaatatggtgggactcagctaccccccttctgtcatttctgtgctt
aagaatgttgaccggtggtcgtttgacgtgttcgccctaaatgaggccagtggggaacac
gcacttaaattcatattctacgagctgctcacaagatacgacctcattagccgtttcaag
atcccgatctctgctgtggtgtcgttcgtggaggccctggaagtgggatacagcaaacat
aaaaacccctaccacaacctgatccacgctgctgatgtcacacagactgtgcactacctg
ctactcaagactggcatggtgcattggttgactgagctggagatctttgccatgatcttt
gcagcagcggtgcacgactacgagcacacagggaccacaaacaacttccacattcagaca
aggtcagacacagcaatcctgtataatgaccgctcagtgttggagagtcaccacgtcagc
gcagcataccgcctactgcaggacgacgacgagatgaacatcctctacaacctctccaag
gatgactggagagagctgcgggctctggtggtggagatggtgctggccacagatatgtcc
tgccatttccagcaagttaaagccatgaagaacttcctacaacaacctgagggcatagac
aagcccaaagccctgtccctgctgctgcacacagcagacatcagccacccggccaaaagc
tgggacctccaccatcgctggaccacctcactactggaggagttcttcagacagggggac
aaagaagcagagctcgggctgccattttctccgctctgcgaccgcaagtccacaatggtg
gcgcagtcccagattgggttcatagacttcatcgtggtgcccaccttcactgtgctcaca
gacatgatggagcgtatcgtcacgccgctcatcgacgaggcttctcattcaggttttgct
ggctttcgacgctcaagtctgaacagtattagctcggatgaagccaagcggcacagtgtg
aagagcgtgggctctgacagcagctcatcaggccaaagctctctgctgacggtggatatg
aagaacttcaaggcgttgtggaatgaagaggtttatcagaacagagagaggtggaaagcc
caggctgctaaagaggcagaggagagagctaaaagggaagcagaggagaaagcccagcag
gaagagactatggagccccaggaggtccacacagaatcagaacagcctgaaccaaaggag
gacaaattggagggggaggcacccgagtcagcggaggtcagcagaccaccagatggtaac
acgggggaaacagaacagggaggacagcctaggagcgccacacacaagaatcctccactg
cataacggagagttgtctgaaggtgctgaatctccagagggtgaagaaaacaagaacaaa
ggagtcgatgcagaagtagcgatggagtaa
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