Lates calcarifer (barramundi perch): 108883292
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Entry
108883292 CDS
T04895
Name
(RefSeq) chemokine XC receptor 1
KO
K04179
C-C chemokine receptor type 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108883292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108883292
04050 Cytokine receptors [BR:
lcf04050
]
108883292
04090 CD molecules [BR:
lcf04090
]
108883292
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Chemokine
CC Chemokine
108883292
Cytokine receptors [BR:
lcf04050
]
Chemokine receptors
CC Chemokine
108883292
CD molecules [BR:
lcf04090
]
Proteins
108883292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108883292
NCBI-ProteinID:
XP_018531763
UniProt:
A0AAJ7LTL3
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Position
LG4:complement(8754638..8758089)
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AA seq
351 aa
AA seq
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MATTESNTIATAESETSPLYDYYTDYENEICDTTVVKHFGAIFTPVFFSIVVILSLFGNI
LVIVILAKYENLKSLTNAFILNLAVSDLFFTAGLPFWAYYHMSGWTLGETACKVVSFVFY
VGFYSSGFLLILMTAHRYVAVMNPLSDIVSTTGFYSVLVSMIIWIASALGATPAVIFTTV
KQNYCVPENSYWSLWGMYQQNILFIMSSLVFVFCYSQIICRLLRPTAQRRRNKTLKLIFT
LMVVFFVGWAPYNIVIFLQSMYYIEQKPVNSKEVSADCDSFEKLQYAFSISRIFAFSHCC
LNPVFYVFVGVKFKTHLKKMLKSWGRNKGSIRSRQSRLTITSLTSGEEFSM
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggctacaactgaaagcaataccattgcaactgctgaaagcgaaaccagtcccctgtac
gattattacactgactatgaaaatgaaatatgcgacacaacagttgtcaagcattttgga
gcaatcttcacaccagttttcttctccattgtggtgatcctcagtctgttcggcaacatc
ctggtcattgtgattctggccaagtatgagaatctcaaatccttgaccaacgctttcatc
ctgaacctggctgtatcagatctcttcttcaccgcaggtctgcccttctgggcctactac
cacatgtccggatggactctaggggagactgcatgcaaagtagtcagctttgtcttctat
gttggtttctacagcagtggtttcctcctcatcctgatgaccgcacatcgttatgtagct
gtcatgaatcctctgtctgacattgtgtcaaccacaggcttttacagtgtcctagtatct
atgatcatttggatagcaagtgccttgggtgccactccagctgtcatcttcaccacagtg
aaacagaattactgtgtacctgagaattcttactggagcttatggggaatgtaccagcaa
aatattctctttataatgagttcattggtatttgtgttttgctactctcagatcatatgc
aggttgctgcgtcccactgctcaaagaagaaggaacaaaactttaaaactcatttttact
ctcatggttgttttctttgtgggatgggcaccttacaatattgtaatatttctacagtca
atgtattacatagagcaaaaacctgtgaactcaaaggaagtatctgcagattgtgactcg
ttcgaaaaactgcaatatgctttttccattagccggatttttgccttttcacactgctgc
ctcaaccctgtgttttatgtgtttgtgggggtcaaattcaaaacccacttgaagaaaatg
ctgaagagctggggccgcaacaaaggcagcattcgcagtagacaaagccgactcacaatc
acatcactgacaagtggggaagagttttcgatgtag
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