Lates calcarifer (barramundi perch): 108883317
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Entry
108883317 CDS
T04895
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883317
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Others
108883317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYRIN
SAM_1
SAM_2
SAM_PNT
DUF2852
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
108883317
NCBI-ProteinID:
XP_018531803
UniProt:
A0AAJ7PM29
LinkDB
All DBs
Position
LG17:27046376..27055058
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AA seq
1539 aa
AA seq
DB search
MSQPTPEPQLSIEKWTTEDVHQWLMTEVKVHQSCADRFIEEEVLGEYLVLFKKKDILDLG
IKCGPAVKITSYLERLKDGSQHESQFPAYVENWTKEQVNQWLLQHVKIRGKYAEQLHDED
VSGDCLVYFSKQDFLDLDIKSGPAVKILAELHQLNKKPEPTLHPTLHTTTDQKEPKPIQP
ELSLNQAKETKQQESNDKTDSQTDEMETQPFEKASERKIIQQPIKEIKRKETVVTTALLN
TSKISVEIQKTLDNLIKGDLKMFHFYLHEHTKSGHKPIPRGRLEGKDTMDTAKVMTSHYG
NEGALWVTIDILKEINQCELACQLEKNMGQLQQRCRPKAVLKKEANQGDKLKNLLTCGGN
SLDSYDRFVVVINKSSPEQVQYLQFLSKMKLFCVLDFDPNSAAPGGLCHSYRESRVANLH
TPSQYQGQIDSVIKNLNLYKQTSWVFCNGRHDLDNDSNKELDYQNWLRKSCRDVEQLVSF
TCNPEVLLHGKSLIVFLLLSPVDTEKDPMFDIYKSFLKHTEEESIINICESQSTYEKWRE
LIQEKCDFDIDHLSINELTLSEVNGTIMALGPLNQSSGRLLPSSGSSVVVLKQKDEDFMT
ALDILCLNQCENTYDENSPEFQDYRIRVEEEFYRGGKVKWWNFYFCDKDKEKPFIKRDKY
ENVKKMIRSQLRDSKNMCVLLNLFHHPGCGGTTLAMHVMWDLRQEFRCAVLKDNALPKAE
VAIQVRRLTKLESEKPCPVLLLVDDSKETENPHDLVNCIRKAAVEDSLNVNVDDAPNCKV
IILNCVRSHSPKEQYRQHNPGLCQYITASLTQDEQKEFEKKLKELKETHDKPENFYSFMI
MKSNFDKKYIDDLARNTLENFDFSTKEAQLFAFLALLNTYVAESEISLSLCEDFFGMKMI
RWQEDSVLERMRPYSNLLIIDTVEEWGGYKGIRILHCSIASACLEELERSCNLKVSDIAM
AILHCDLFFSVGVVKHRFMLSIQRMLIERQRKKDGDEREPFSPLIDKIHSQEGRQAVQEI
FVKASSRFVSSASIPQALARYLYINERDFPEALIWAEKAKNIKENPYTFDTIGQLHKSNL
KSNIHREKQETSLNPEDLNTNIKIAGNAIRAFKRAQDLANTEDEPEEKAADDESEDYPRK
SYNVYGYVGVLEIAFLVFEILSRLPFFEESDPMKKKYLQSFLQKVIPITNVYKKDNEINN
RYMEIIKEHEQFLQSLKAEVKETFELLDCYFMYIKGNNSEFDSKNRWNVCSHFKKYVTLF
CTAREEIKKERQNNPNLNWKIDIEERRLFLEERQADTFAGILQHLDKPAEEIEKITECYA
FLQQQQQFINKKQKTKETINYILSNIVLYVLKPKSKHVKSYSSLSALLLKTLQDVGLGYP
FPDPYYLALLLLWPSPTQENTEIGTYVKAIRNSYRKRLTLLFRNRSTVAHLYLGKEEGLK
RLVSKPQLDENFKDMRRDALAQLWRNGDIFKDKAIINRLHRVCGTIEQGEVFANYGKLKI
PVRPALIAGIRSGFSTEKVSFYLGFAIDGPLAYDIQYEN
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccaacacctgagcctcaactttcaattgaaaaatggaccacagaagacgtc
caccagtggctgatgacagaggtcaaagttcatcagagttgtgccgacagattcattgaa
gaggaagtgttgggggaatatttagtcctcttcaaaaagaaagatatactagacttggga
ataaaatgtggtcctgctgtcaaaatcacatcttacctagagaggcttaaagatggatca
caacacgagtcacagttcccagcatacgtggaaaactggacaaaggagcaggtcaaccag
tggttactacagcatgtcaaaatacgtggcaaatatgcagaacaactccacgatgaagat
gtgtctggagactgtcttgtttacttcagcaaacaggattttctggatctggatataaaa
agcggtcctgctgtaaagattctggcagagcttcatcagctgaacaagaagccagagcca
acgctgcatcccacccttcacaccaccacagaccaaaaagaaccaaaacccattcaacct
gaactgagtctgaatcaagccaaagaaaccaaacaacaagaatctaatgataaaactgac
tcacaaacagatgaaatggaaacgcagccatttgagaaagcttcagagaggaagatcatt
cagcagccaatcaaggaaatcaagagaaaagaaactgttgtgaccacagccctactgaac
acatccaagatcagtgtggagatccagaaaactctggacaaccttataaaaggagacctg
aaaatgtttcatttctacttacatgagcacacaaaatctgggcataaacctattcctcgg
ggtaggctggagggcaaggacaccatggatacagcaaaagtaatgactagtcactatgga
aatgagggggctttatgggtaacaatagacattctaaaggaaatcaaccagtgtgaactt
gcctgtcagctggaaaagaacatgggtcaactgcagcagcggtgtcgtccaaaagcagtt
ttgaagaaagaagcaaaccagggtgacaaactaaagaatttgttaacttgtggtggaaac
tcacttgacagctatgacagatttgttgttgttataaacaagagtagtccagaacaagtg
cagtatctccagtttttgagtaagatgaaactgttctgtgtgttagactttgacccaaac
tctgctgctccaggtggactgtgtcattcctacagagagtcaagggttgccaatctccat
actccatctcagtatcaaggacagattgactcagtgataaagaaccttaacctttataaa
cagaccagctgggttttctgtaatggcagacatgaccttgacaatgactcaaacaaggag
ttagattaccagaactggctgaggaaatcttgcagagatgtagagcagttggtttcattc
acttgcaaccctgaagttcttctccatggcaagagtctcattgtattccttctactctca
cctgtggacactgagaaagatccaatgtttgacatctacaagtctttcttgaaacacaca
gaagaggaaagcattatcaacatatgtgaatctcagagcacatatgagaagtggagggag
ctgatacaagaaaagtgtgactttgacatcgaccatctatccattaatgagctgaccctc
agcgaggtcaatggaactattatggcactggggccattaaatcagtcgtctggaagactg
cttccctcctctggttccagtgttgttgtcctgaaacagaaggatgaagattttatgaca
gctcttgacattttgtgtctgaatcaatgtgaaaacacctatgatgaaaatagtccggag
tttcaagactaccgaatcagagttgaagaggaattctacagaggaggcaaagtcaaatgg
tggaacttctacttctgtgacaaggacaaagagaagccatttatcaaaagagacaagtat
gaaaatgttaagaagatgatcagatctcagttgagagattcaaaaaacatgtgtgttctg
ctaaatctcttccaccatccaggatgcggtggaaccaccttagcaatgcatgtgatgtgg
gatctccgtcaggagttcagatgtgctgtgctgaaagacaatgcactgccaaaagcagaa
gttgccattcaagtcagaaggctcacgaaacttgaaagtgagaaaccatgtccagttttg
ctgttagttgatgattcaaaagaaactgagaatcctcatgatcttgttaactgcatacgt
aaagctgctgtagaggatagcttgaacgtaaatgtggatgatgcaccaaattgcaaagtc
atcatccttaactgtgttcgttctcacagcccaaaagaacagtacagacagcacaatcca
ggactgtgtcaatacatcactgcttcactgactcaagacgaacagaaggagtttgaaaag
aaacttaaagagctcaaagaaactcatgacaaacctgagaacttttatagtttcatgatc
atgaagagcaattttgacaaaaaatacattgatgatcttgctcgtaacacactggagaac
tttgatttcagcacaaaggaggcccaactgtttgcttttctggccttacttaatacatat
gtggcagagtctgaaatctctctctctctctgtgaggatttctttgggatgaaaatgatt
cgctggcaagaagacagtgtattggaaagaatgaggccatattcaaaccttctcatcata
gatacagttgaggaatggggaggatacaaaggaatcagaatccttcattgctccatagca
tctgcctgtctggaagagttggagaggagctgcaatttgaaagtaagtgatattgctatg
gcaattcttcactgcgatctgttcttcagtgttggagtcgtcaaacacagattcatgctc
tcaattcaacgaatgttgattgaaaggcagcgcaaaaaagatggagatgaaagagaacca
ttttctcctcttatagacaaaatccacagccaagaagggagacaagctgtccaagaaatc
tttgtgaaagcatcgtccagatttgtgtcaagtgcatctattcctcaggcactggcaaga
tacttgtacatcaatgagcgtgacttcccagaggctctaatatgggctgaaaaggccaag
aacattaaagaaaacccatacacatttgacacaattgggcaactccacaaaagcaattta
aaatctaacatccacagagaaaaacaggagacatcactcaatccagaagacttaaacaca
aacattaaaatagcaggtaatgctatcagagcatttaaaagggctcaagacctggcaaat
acagaggatgaacctgaggagaaagcagcagatgatgagtctgaggactaccccagaaag
tcatataatgtttatggctatgtaggtgtgctggaaattgctttcttggtctttgagata
ttgagcagacttcctttctttgaggaaagtgatccaatgaagaagaagtacttgcagagt
tttctgcaaaaagtaattcccatcaccaacgtgtataaaaaggacaatgagatcaacaac
agatacatggagatcatcaaagaacatgagcagttcctccaaagtttgaaagctgaagta
aaagaaacttttgaacttcttgactgttacttcatgtacataaaagggaacaattcagaa
tttgattcaaagaatcgttggaacgtctgtagtcattttaaaaagtatgtaactcttttt
tgcacagcacgagaggaaataaaaaaagaacgacaaaacaatcctaatctcaactggaaa
atagacattgaagaacgacgactgtttcttgaagaaagacaagcagacacatttgctgga
attcttcagcatttggacaaacctgctgaagaaattgagaagatcacagaatgctatgca
ttcttgcaacaacaacaacaatttatcaacaaaaaacaaaagacaaaggaaacaatcaat
tacattttgtcaaacatagttctttatgttttgaaaccaaaatctaaacatgtgaagagt
tacagctccctctctgctctacttttgaaaactctacaagatgtcggacttgggtatccc
ttcccagacccatattacctggctctgctcttactctggccaagtcctactcaggaaaac
acagaaattgggacatatgtgaaagcaattcgaaactcatatcgcaaacgcctgacctta
ttgtttcgaaacaggagcactgttgcccacctctacctggggaaagaagagggactcaag
aggcttgtttctaaaccccaactagatgagaattttaaagacatgcgccgcgatgccttg
gcacaactttggcggaatggagacatatttaaagacaaagccattatcaaccgtcttcat
cgagtttgtggaaccattgagcaaggagaggtgtttgccaattacggtaaactgaaaatc
ccagtgcgtccagctcttattgctggtataaggagtggtttcagcactgaaaaggtttcc
ttctatcttggttttgctatcgatggaccccttgcttatgatattcagtatgaaaactag
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integrated database retrieval system
