Lates calcarifer (barramundi perch): 108883332
Help
Entry
108883332 CDS
T04895
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883332
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108883332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
108883332
NCBI-ProteinID:
XP_018531823
UniProt:
A0A4W6C6A3
LinkDB
All DBs
Position
LG4:complement(9447973..9465429)
Genome browser
AA seq
498 aa
AA seq
DB search
MDLGENSWSMVKREVSSSPGSPAEQTYLPGDSRRDGQTSDELRTPPSELDALGHRRSDGR
SLHSYVHFGHHNNTLTGAEDIPLFTDLDQGSKLVLSSGAHKASLLVDPADMYQTLAIAAA
QSQTGYDSSSGGYMHSNPNSPVYVPSSRVGPMIPSLSYLQASGSAQPSHAVSSHSVWSQS
APESPSYSTGSPHASSRFHYPPSPPMNNGTPRDTGYSNTLNVSNRDQYGLSRPLSGSYPS
PYSPYVAPQLSQLPSPWTGGPFDNTMLHTLQSRGAPLIRGPNGVSDILDDMGESRECVNC
GSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRTSTSRRIGLSCANCQTSTTT
LWRRNADGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKTKGSSGNNNSVSM
TPTSTSSSNSEDCSKTSSPSGQVSGVSSSVLSSSGEGTGSDSAVKYPAQDGLYTSVGLTQ
PSDVASVRGEPWCPMALA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcgaaaacagctggtccatggtcaagcgagaagtatccagcagcccaggg
tcaccggctgagcagacctacctgcccggtgacagcaggagggacggtcagacctcggac
gagctgaggacacccccgagcgagctcgacgcgctggggcaccgccgctccgacggcaga
tcgctacactcctacgttcacttcggacaccataacaacaccctgaccggcgccgaggac
atcccgctgtttacggatttagaccagggcagcaaactcgtcctctccagcggagcgcac
aaggcgagcttgctggtggacccggcagacatgtaccaaacactggccatcgccgcggct
caaagccagactggatatgattcctcctctggcggttacatgcactccaaccccaactct
cccgtgtacgtgcccagctcccgggtgggccccatgatacccagcctgtcttacctgcag
gccagcggctccgcgcagcccagccacgccgtctccagccactcggtctggtctcagtcc
gccccggagagcccctcatatagcaccgggagcccgcacgcctcgagtcggttccactac
cctccgagtccgcccatgaataacggcacgccgcgggacaccggctacagcaacacgctg
aacgtaagcaacagagaccagtatggcctctctcggcccctcagcgggagctacccgagc
ccatactctccttacgttgcaccgcagctctcccagctgccctcgccttggaccggggga
cctttcgataacacgatgctgcacaccttgcagagcagaggcgcgcccttgatccgagga
ccaaacggagtttcagatattctcgacgacatgggggagagccgagagtgcgtcaactgc
ggctccatctccacgccgctctggaggcgcgacggcacgggccactttctctgcaacgcc
tgcggcctgtacagcaaaatgaatgggctgagcaggccattaattaaaccacagaaacgg
acgtcaacgtccagaagaatcggcctgtcctgcgccaactgtcaaaccagcacaaccact
ctgtggcgcagaaacgccgatggagagccagtgtgtaacgcatgcgggctctacacgaaa
ctacatggggtacctcggccgctcgccatgaagaaagagggaattcagacaagaaaaaga
aaaccgaaaacattgaataaaacgaagggatcctctggaaataacaactctgtctctatg
actcccacatccacctcttcatccaattctgaggactgctcaaaaaccagctctccctct
ggacaggtgtcaggggtcagttcatccgtgctgtccagctcgggggagggaacaggctct
gactcggcagtgaagtacccggcacaggacggcctgtacaccagtgtgggcttgacccag
ccgtcagatgtagcttcagtgaggggcgaaccctggtgccccatggctttagcttga
DBGET
integrated database retrieval system
