Lates calcarifer (barramundi perch): 108883369
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Entry
108883369 CDS
T04895
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108883369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883369
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108883369
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
108883369
NCBI-ProteinID:
XP_018531910
UniProt:
A0A4W6CHU3
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All DBs
Position
LG4:complement(10188895..10304731)
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AA seq
1341 aa
AA seq
DB search
MLFLSSGTVDATPRSTAIGQVQQGKTVYHISVTLKETPGDAPVSMLGMGQVTHTLVENCQ
PGGEMISLVPMENSPRLGRARQEPDRWPSLICTGRAGRQREEVVVEENEEELEEVEGKMK
TDRFLKQPFENAGSSSQQGKDVADLTAQTDTQDQRIRSSTLRSVTVQARGIVFSEHGTVT
GHSSLPRAVLRRPRQDEAPLGRRTVSMYGDPLKQQRDTQPEQEGPLRRPRSVCMLAGPGP
VLSDSRTQQPLSRAGILENNPQFRSRKAELRAVDGLNAVVAQRPPATAEVTPRVHQRNWK
PRPVSMTVLELRKRGSDDELDSQRSCNHTGSDGRGFLKGGFRWRLFGKAPQDKSKEKDGH
KDASPKSSKSDAPKSTLSTLRRSLSLRIRRTRPRDKVNLGSEGESQERPRTKSIAEETTM
PPRPFSYLTGRTLTTSSEQIEDGGMQYIQYHSRGKVKVMEVPLCPTKLSSKPVQEEPSIW
QLIANRFRRKEQPCSGKCESQQSQSKDSGQYPLAGNNKSQPVTIETLAGIDSHKGQDSFV
NSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSY
LLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLISYRNTAEVPMVLVGT
QDAISAANPRVIDDSRARKLSNDLKRCTYYETCSTYGLNVERVFQDVAQKVVAMRKKQQL
SIGPCKSLPNSPSHSSVPAASIPSVHINQAANGGGAFSDYSSSVPSTPSISQREMRIETI
AASNTPTPIRKQSKRRSNIFTSRKASEQAKSVDSKTDSIGSGRAIPIKQGILLKRSGKSL
NKEWKKKYVTLCDNGVLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVATVAPTA
SPKTNGLTKDRSALQLGIGNTGAPHSNSSTSLQTGGSAFGGSKDGMHQRSFSVSSADQWN
EAINTSTSSVAPNGMSDPANSTVGSATSPKLEPPPSPHANRKKHRRKKSTGITKPDGLSA
GNEEQEDSFEFIIVSLTGQTWNFEASTYEERELWVQAIESQIFASLQSCESIKNKSRLGS
QSDAMAIQSIRNVRGNSFCVDCDAPNPDWASLNLGALMCIECSGIHRNLGTHLSRVRSLD
LDDWPVELSMVMTAIGNAMANSVWEGALESYTKPGSDSTREEKERWIRAKYEQKLFLVGL
PQSDVPLGQQLLRAVVEDDLRLVVVLLAHGTKEEVNETYGDGDGRTALHLSCAMANVVIT
QLLIWYGVDVKSRDARGQTPLSYARRAGSQECADILLQHGCPNDTSSLTSVPTPNMSRRN
PNPNINNNNAQCELNRSISIM
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgctattcctcagcagtgggacggtggatgcaaccccaaggagtacagctattggccaa
gtgcagcaggggaaaaccgtttaccacatctctgtaaccctgaaagaaacaccgggagat
gcgccggtgtcaatgctgggaatgggccaggtcacccacaccctggtggagaactgccag
ccaggaggagagatgattagtttagtgccaatggagaacagccccaggctgggcagggca
cggcaggagcccgacaggtggccctccctgatctgtacaggtagagctgggaggcaaaga
gaggaggtcgttgtggaggagaacgaggaggagttggaggaggtggagggaaaaatgaag
acagacaggtttttgaaacaacctttcgagaatgcaggtagctcctcacagcaaggcaaa
gacgtggcagatttaactgctcagacagatacccaggatcaacgcattcggagctcaact
ttacgctctgtcactgtccaggctagagggattgtcttttcggaacatggcactgttaca
ggacacagctctctgccgcgggccgtgttgcgaaggccacgtcaggatgaagctccactc
ggcaggagaacggtgagcatgtatggcgacccactcaagcagcaacgagatactcaacct
gaacaagaaggaccgctgcggaggcccaggagtgtttgcatgctggcaggcccaggccca
gtcctgtcagactcccggacccagcaacccctcagcagggcaggcattttagaaaacaac
ccgcagttcaggagccggaaggctgagttgagggcagtggatggcctcaatgctgtcgtg
gctcagcggcctccagccactgcggaggtgacccccagggtccaccagaggaactggaag
cccaggcctgtcagtatgactgtactggagctgagaaagaggggctctgatgatgagtta
gacagccagaggagctgcaaccacacaggcagcgatggaagaggttttctcaaagggggc
ttccgctggaggctatttggcaaagcacctcaagataagagcaaggagaaggacggtcac
aaagatgcttctcccaaatccagcaaatctgatgctccaaaaagtacgctgagtacttta
agacggagcctcagtctacgaatcaggaggactcggccccgggacaaagttaatttaggg
tctgagggggagtcacaggaacgccctcggactaaaagtattgctgaggagacaacaatg
cctccacggcctttctcgtacctcacagggagaacgcttacaacttctagtgagcagata
gaggatgggggcatgcagtacattcagtaccacagcagggggaaggtcaaggtaatggag
gtgcccctctgtccaacaaaactgtcctccaaacccgttcaggaagagccaagcatatgg
cagctcatagccaaccgtttcaggaggaaagagcagccatgcagtggcaaatgtgaatcc
cagcagtcccagagcaaagacagtggccagtatcccctggctgggaataataagtcacag
ccagtcaccatagagactctggcaggcattgactcccacaaaggtcaagactctttcgtc
aacagccaggaatggacattgagtcggtcagtgccagagctgaaggtgggcattgtggga
aatctgtccagtgggaagtctgccttggtgcaccggtacttgacaggcacatatgtgcag
gaggagtcccctgaaggtggacggttcaagaaagaaattgttgttgatggacagagctac
cttcttttgatcagagatgaaggagggcctccggaattgcagttcgctgcctgggtggat
gcggtggttttcgtctttagcctggaggatgagatcagcttccagacagtctacaattac
tttctgcgcctcatcagctacaggaacacagctgaggtccccatggtcctcgttggaaca
caagatgcaatcagtgctgccaaccccagagtgatcgatgactcgcgggccagaaagttg
tcaaatgacctgaagcgctgcacgtactatgagacctgctccacctatggcctgaatgtg
gagagagtcttccaggacgttgcccagaaggtggtggccatgaggaaaaagcagcagctc
tctattggtccatgcaaatctctccctaactctcccagccattcgtcagtccccgctgca
tctatcccctctgttcacattaaccaggcggccaatggtgggggtgcattcagcgactac
tcctcctctgttccctccacccccagcataagtcagcgggagatgcgcattgagaccatc
gctgcctccaacacgcccacgcccatccgcaagcagtcaaagcgccgctccaacattttc
acatcacggaaagccagtgaacaagcaaagagcgttgacagtaaaacagacagcataggc
agtggaagggccatacctatcaaacagggaatccttctgaagcgaagtggcaaatccctc
aacaaggagtggaaaaagaaatatgtcacactgtgtgataatggcgtcctcacttaccac
cccagtttacacgactacatgcagaatgtgcatgggaaagagattgacttgctgaggacc
acagtcaaggttcctgggaagcgaccacccagagcggtggccactgtcgcccccactgcc
agtccaaaaaccaacgggctgaccaaggaccgcagcgccttgcagctgggcataggaaac
acaggtgctcctcactccaacagcagcacatccctgcagacgggtgggtcagcgttcggc
ggcagtaaagacggcatgcaccaacgctccttctccgtgtccagcgccgaccagtggaat
gaagccatcaacaccagtacaagcagtgtagcccctaatggaatgagcgatccagcaaat
tccactgtgggcagcgcgacgagtcctaaacttgagccacctccctcgcctcacgccaac
cgcaagaaacacagacggaaaaaaagcacgggcatcacaaagccagacggcttatctgca
ggcaatgaagagcaagaggattccttcgagttcatcatcgtgtcgttgacgggccagact
tggaactttgaagcgtccacatatgaagagagggagctgtgggtccaagcaatcgagagc
cagatcttcgcaagcctgcagtcctgcgagagcataaagaataagtctcggttaggtagc
caaagtgatgcgatggccattcagtccatacgaaatgtgagggggaacagcttctgtgtg
gattgtgatgcacccaacccagactgggccagtttgaaccttggtgcgctgatgtgcatc
gagtgctctggcatccaccggaacctgggcacccacctgtcccgcgtccgctccctggac
ctggacgactggcccgtggagctcagcatggtgatgacagccatcggaaacgccatggcc
aacagcgtttgggagggcgccttggaaagctacaccaagccggggagcgacagcaccagg
gaggagaaggaacgctggatccgagccaagtatgagcagaagctgttcctggtggggctg
ccccagtcggacgtgcccctggggcagcagctgctccgggcggtggtggaggatgacctg
aggttggtggtggtgctgctggcccatggcaccaaggaagaggttaatgagacctacggg
gacggagacggacgcactgctctgcacctgtcctgcgccatggccaacgtggtcatcaca
cagctgctcatctggtatggtgtggatgtgaagagtcgagacgctcgcggccagacaccg
ctgtcctacgcccggcgagctggcagccaggagtgcgcagacatcttgctgcagcatggc
tgccccaacgacacgagcagcctgacctcggtgcccacgcccaacatgagccgccgcaac
cccaaccccaacatcaacaacaacaacgcccagtgtgagctcaaccgcagtatcagcatc
atgtag
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