Lates calcarifer (barramundi perch): 108883385
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Entry
108883385 CDS
T04895
Symbol
cacna1eb
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108883385 (cacna1eb)
04020 Calcium signaling pathway
108883385 (cacna1eb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108883385 (cacna1eb)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108883385 (cacna1eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
108883385
NCBI-ProteinID:
XP_050925931
UniProt:
A0AAJ8DP44
LinkDB
All DBs
Position
LG4:10650635..10706634
Genome browser
AA seq
2401 aa
AA seq
DB search
MLTSSNQSLSLSLTPNRYSPSRCGPGGETRVQSSLSLPEPEAWRKSSPAARHGLAQGARS
SSLQVPHAVPEYLGLPPRAASFDVPYGQEEGLSDQGSGSLSPHCMLRRRGGLVEQKDIIM
AHQAHKIQSTPQARRKEWEMARFGDESAPSTVDSGDGDLERGGDGQDAASASAAAAGGLT
ASMKQAKAQRARTMALYNPVPHQQNCLTVNRSLFIFAEDNIIRKYARRIIEWPPFEYMIL
ATITANCVVLALEQHLPGEDKTPMAKRLEKTEPYFIGIFCFEAGIKLVALGFVFHKGSYL
RNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMK
AMIPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLPSVDILDNETVDSSELAFACGVRK
CPEKYDCNDTWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGPTWNWMYF
IPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAE
EVMLAEENKNSGRSPLDVLKRASKKTGARRGAPGDDKYTDMSTASMSRSRMNFRSGRRGP
AAYLRRKERMLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHNQPDWLTIFLYYAEFV
FLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRAL
RLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFEDY
TPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLL
NVFLAIAVDNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRP
NFPEEPEGVMGAADEQPLSGSNAFANRRERRRKVNMSVWEQRANQLRKRRQMASREELFG
SPTEDTIETPTIAHHVPTLSPEASPAHLPESPMSVGMPLPEPPMSISIPIPEPPVAEPLV
NLSEEKTGGANHRTAGGGRHRMARKFRPSQGPDEGARHRRHRHREARTEAKSLDCAQAPH
EVLQVRRSLSQERKILDEQEEKDEREEKTEVEGGSVQDDCGTCIVNPYADVGEDCRRSTV
SGADIPDPPQCEQLLDCTWSEQGEGGHADQYEPLCQNIPVEPALEATEYTVSAIEAENRP
VSIKRDKSNLEGSVAIEMSAQPLLELTPMTVNSKELEAYQSEQKEREEETEEEEPPIPPK
PVAPDSMFIFKASNPIRRICHYVVTLRYFEMTILLVIVASSIALAAEDPVCTSSDRNKVL
RYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDMWNILDFIVVVGALIAFALTNNKGRD
IKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQL
FKGKFFYCTDSSMNTEKECQGYYIDYSRDKKEVKRREWKRHEFHYDNVCWALLTLFTVST
GEGWPQVLQHSTDVTEENMGPSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQG
DKMIQECSLEKNERACIDFAISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLVMIAL
NTVVLMMKYHSAPTAYDTVLKHLNTAFTVLFSMECILKIMAFGFVNYFRDTWNIFDFITV
LGSITEIIVDLQSVNTINMSFLKLFRTARLIKLLRQGYTIRILLWTFVQSFKALPYVCLL
IAMLFFIYAIIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCL
SGQECEPDPSIAPLAMSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLT
RDSSILGPHHLDEFVRIWGEYDRLACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRL
VLMNMPVDEDMTVHFTSTLMSLIRTALDIKIARGGEDRIALDAELQKEISIIWPYLPQKT
LDLLVPINKDTDMTVGKIYASMMIMDYFKQNKAKKLRQQLEAQKSNLMFKRLDASTLPED
ILSNTQPLPMMAHSAGSALTRGGFVALSPISPQELFLQPMSSDTDASQQQNLVGECSRGI
EAPLELPVGRGLCVRASSMPRLAVESQQTEVASGSMKRSASTVGDQRVNGLWQEEKSPER
VYRPRHKSYKAAVSRSEHWQQGDRERGRSKERCHLLSPDTSRCNSEERSLQPSRSSSVER
AHPQDKQGNSSDSPVPSTSESSTPSGRRPLSQTPTRSRPHISYSPLVCRTQASVGEDEDE
QGSPETMRRGKPTWETQEGVAGERLSEPGRHPSPPRRYPSEPFLASQEDDHSPDPSGPME
TLTFEAAVACSLGRANTISSARPRLRTGWQVPNGHFRKRLAQTASVAGCDPLSDTEEDDR
C
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccagttcaaaccagtccctctccctctccctcactcccaaccgatactctcca
tccagatgtggtccaggaggagaaactcgtgtccagtcctccctgtccctccccgagcct
gaggcctggaggaagtccagtccggccgcccgtcacggccttgctcagggagctcgctcc
tcctctctgcaggtccctcatgctgtccccgagtacctggggctgccccctcgagcggcc
agctttgatgtgccttacggtcaggaagagggcttgtccgatcagggttcggggtctctg
agcccccactgtatgctgcggcggcgtgggggacttgtagagcagaaggacatcatcatg
gctcaccaggctcacaaaatccagagcacgccgcaggcccgcaggaaggagtgggaaatg
gctcggtttggagacgagtccgctcccagcacggtggactccggggatggggacttggag
cgcggtggggacgggcaggacgcggcgtcggcgtcggcggcggcagcgggaggactgacg
gcttccatgaaacaagccaaagcgcagcgggcccggaccatggctctgtacaaccccgtc
ccccaccagcagaactgcctcaccgtcaataggtcgctcttcatattcgcagaggacaac
atcattaggaaatacgccaggagaatcattgagtggccaccatttgagtacatgatcctg
gccaccatcaccgccaactgtgtcgtcctggccttggagcaacacctcccaggagaggac
aagacccccatggcaaagagactggagaagacagagccatactttattgggatcttctgc
ttcgaggcggggatcaagctggtggcccttggtttcgttttccataaaggctcctacctg
aggaatggctggaacgtcatggacttcatagtcgtgctcagtgggatccttgccactgct
ggtgcccacatgaacatcccggttgaccttcgaaccctgagggctgtgcgagtgctgaga
cctctcaaactcgtctccgggatccccagcctgcagattgtgctgaagtctatcatgaag
gccatgatcccgctgctccagatcggccttttgttgttcttcgccatcctcatgtttgcc
atcatcggtctggagttctacagcgggaagcttcaccacacctgcctgccatctgttgac
atcctcgacaatgagactgttgactcatccgagttggcatttgcatgtggagtgaggaag
tgcccagagaagtacgattgcaacgacacctggatcgggcccaacgacggcatcacgcag
ttcgataacatcctgtttgctgtgctcaccgtcttccagtgtatcaccatggagggatgg
acagccgttctttataacaccaacgatgccttgggtcccacatggaactggatgtacttc
atccctctcatcatcattggctcgttctttgtcctgaacctggtgctgggagtcttgtct
ggagaatttgccaaggagagggagagggtggagaaccgacgggctttcatgaagctgcgc
cgccaacagcaggtggagagagaactgaacggctaccgagcctggatagacagggcagag
gaggtaatgcttgcagaggagaataaaaattcagggagatcgccgttagatgtgctgaag
agagcgagtaagaagacaggtgcacggagaggagcgccaggggacgacaagtacacagac
atgtctactgccagcatgtcaagatcgaggatgaacttccgcagtggccgccgtggccct
gctgcctacctgcgacgcaaagagcgcatgttacgaatctccatcaggcgcatggtgaag
acagacactttctacttgatggtgctcagtctggtggctctaaacaccatctgtgtggcc
atcgtccaccataaccagcccgactggctgaccatcttcctctactatgcagagtttgtt
ttcctggggctgtttttggctgagatgtttttgaaaatgtacggtctgggtttccggctc
tacttccattcgtctttcaactgctttgactgtggggtcattgttggcagcatcttcgag
gtggtttggggcttcttcaggcccggtatgtcatttgggatcagcgtactgagggcactg
agacttctgagaatttttaagatcaccaagtactgggcctctctcaggaacctggttgtg
tccctcatgagctccatgaagtccatcatcagcctgctttttcttctcttcctcttcatc
gtggtgtttgctctgctggggatgcagcttttcggaggaaggttcatctttgaagattac
actcccaccaactttgacacgtttccagctgccatcatgacagtgtttcagatcctgact
ggtgaggactggaacgaggtgatgtacaacgggatccgctcacagggaggtgtgcagtat
ggcatgtggtcatcgatctacttcatcgtgctcacgctgtttggaaactacacgctactg
aacgtcttcttggccatcgctgtggataatctggccaatgcacaggaactgacaaaggat
gaagaagaggaagaggagttcttcaaccagagatacgcccgaggcagggatggcttgatc
tctgatgggagaagaagaccctacctatacaggaaacgggcgatccaccgaggtcgacca
aacttcccagaagagcccgagggtgtgatgggggccgcggacgagcagccactcagtggc
tccaacgctttcgctaaccgccgggagaggaggagaaaagttaacatgtccgtgtgggag
cagagagcaaaccagctgcgcaaacgtcgtcagatggcgagcagggaggagctgtttggc
agccctacggaggacaccatcgaaactcccactatcgcccaccatgtccccaccctttcc
ccagaggccagtccggctcacctccctgagtctcccatgtctgtggggatgccgctcccc
gagcccccgatgtccatctccatccccatcccagagcctcctgtggctgagcctctggta
aacctgagtgaggagaaaacaggaggggctaaccaccggaccgcaggtggcgggaggcac
aggatggcccgcaagttcaggcccagtcaggggccagacgaaggggcgcgccacagacgc
caccggcaccgcgaggctcgcactgaggccaagagtctggactgtgcacaagcgccacat
gaggtgctgcaagtgagacggtcgctcagccaggagaggaagatactggatgagcaggag
gagaaggatgaaagggaggagaaaacagaggtggaaggagggtcagtacaagatgattgt
ggaacctgcatcgtcaacccatatgcagacgttggagaagactgtagaagatctactgtt
tctggcgctgacattcctgatcctcctcagtgtgagcagctgcttgactgtacctggtca
gagcagggtgagggcgggcacgcagaccagtatgagcccctgtgccaaaatatcccagtg
gagccggcattagaggccacagagtacactgtgagcgccatcgaggctgagaatcgccca
gtctccatcaaacgcgacaagtccaacctggagggaagcgtggccattgaaatgtctgca
caaccactgttggagctcacacccatgacagtgaacagtaaagagttggaggcgtaccag
tccgagcagaaggagagagaggaggagacggaggaggaggaacctccgattcctcccaaa
cctgtagctcctgacagcatgttcatcttcaaggcctctaaccctatcagaaggatctgc
cactacgtggtcactctacgctacttcgagatgaccatcctccttgtgatcgtggcgagc
agcattgcattggctgctgaggacccagtgtgcactagctcagacagaaacaaggtcctg
cgttattttgattatgtcttcactggtgtgttcacctttgaaatgataattaagatgata
gaccagggtctcatcctgcacgacggctcttacttccgagacatgtggaacatcctggac
ttcatcgtggtggtgggggctctgattgcctttgctctaacgaacaacaaaggcagagac
atcaagacaataaagtctctcagagttttgagagttctgcggcctcttaaaactatcaag
agactccctaaactcaaggctgtttttgactgtgtggtcacatctctgaagaacgtcttc
aacatcctcattgtgtaccagctcttcatgttcatctttgctgtcattgcggtgcagctc
tttaaggggaagtttttctactgcactgacagctccatgaatacagaaaaggaatgccaa
ggctactacattgactacagcagagacaaaaaggaggtaaagaggagagagtggaagaga
cacgagtttcattacgacaacgtctgctgggccctcctcacgcttttcactgtttcaact
ggagagggatggccccaggtcctgcagcactcgactgacgtaacagaggagaacatgggg
ccgagtcgggggaatcgaatggaaatgtccattttctacgtggtttacttcgtggtcttt
ccattcttcttcgtcaacatctttgtggctctgatcatcatcaccttccaggagcagggc
gacaagatgattcaggagtgcagtctagagaagaatgagagagcttgcatcgacttcgcc
atcagcgccaagccgatgacccgctacatgccccagaacagacaaaccttccagtacaga
ctctggcactttgtggcatcgccctcctttgagtacacggtgctcgtcatgatcgccctc
aacactgtggtcctcatgatgaagtaccactctgccccgacagcgtatgatacagtcctg
aaacacctaaacacagctttcactgtcctcttctccatggagtgtatactcaagattatg
gcatttggttttgtgaactactttcgagatacttggaatatttttgatttcatcaccgtt
cttggcagcatcactgagataattgtggatttacagtcggtgaacaccatcaatatgagc
ttcctgaagcttttccgaacagccaggttgatcaagctgctaagacagggttacaccatc
cgcatcctgctgtggacctttgtacaatcatttaaggctctgccttatgtctgtctcctc
attgctatgcttttcttcatatacgccataattggaatgcaggtgtttggaaacatcaag
ctgaatgacgagagccacatcaatcagcacaacaattttaagacgtttttcagtgcactg
atgcttctgttcaggagtgcgacaggagagtcttggcaagagatcatgctctcctgtctc
tcaggtcaggagtgtgaaccagatccctccatcgcccctctcgccatgtctccagaccat
gagggaggctgcgggactgactttgcttactgctacttcgtctccttcatcttcttcagc
tcgttcctgatgttgaatctgtttgtggctgtgatcatggataactttgagtacctgaca
cgagactcctcgatcctcgggccccatcacctggacgagtttgtccgcatctggggggag
tatgatcggttggcatgtggtcgtatccactacacagccatgtacgagatgttaacacac
atgtcaccgccgttgggccttggcaaaaaatgtcctgccaagatcgcctataagaggttg
gtgttgatgaacatgcctgtggacgaggacatgacagttcacttcacctccactctgatg
tcgctcatccgcacagctctggacatcaaaatagctcgaggtggtgaggaccgtatcgct
ctggacgctgaactgcagaaggagatcagtatcatttggccctatctgcctcagaagacc
ttggacctactggtacctatcaacaaagatacggacatgacagtggggaagatctacgct
tcaatgatgataatggactacttcaaacagaacaaagccaagaagctcaggcagcaacta
gaagctcagaagagtaacttgatgttcaagcgtctggacgcctctaccctcccggaggac
attctctccaacacccagccgctgccaatgatggctcacagtgctggttcagccctaacc
agaggaggctttgtagctttgagcccgatctcaccccaggagttgtttttgcagcccatg
agctcagacactgatgcgagtcaacagcagaatctggtgggcgagtgcagtagggggatt
gaagccccactggagcttccggtagggaggggcctgtgtgttcgggcctcttccatgccc
cgtctggctgtagagtcgcagcagacggaggttgcgagcggctctatgaagcgttctgct
tccactgttggggatcagcgtgtgaacggtctttggcaggaggagaaaagtcctgagcga
gtctatcgacctcgtcacaaaagctacaaggctgctgtttctcggtctgaacactggcag
cagggcgacagggagcgtggtcggtctaaggagcgctgtcacctcctctctccagacaca
tctcgctgtaactcagaggaaagaagcttgcagccctcacgatcctccagcgtagagaga
gcacaccctcaagataaacagggcaacagctcagacagtccagtgccgtcaacctcagag
tccagcacccccagcggccgacgaccattatcgcagaccccaacccgctctcgccctcac
atctcctactccccgctcgtgtgtcgcacacaagcctccgtcggcgaagacgaggatgaa
cagggcagcccagagaccatgaggcggggcaagcccacctgggagacccaagagggcgtc
gccggagagcggctgagtgagcccggacgacacccgtccccacctcgacggtacccctcc
gagccgttcctggcctcacaggaggacgaccacagcccagacccctctggccccatggag
acgttgaccttcgaggcggccgtggcctgcagcctgggacgcgcgaacaccatcagctcg
gcccgcccgcgcttgcggactggctggcaggtccccaacggacactttcggaagcgtctg
gcgcagacggcctcagttgcgggctgcgatcctctcagcgacacagaggaggacgacagg
tgctag
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integrated database retrieval system
