Lates calcarifer (barramundi perch): 108883411
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Entry
108883411 CDS
T04895
Name
(RefSeq) opsin 7, group member a
KO
K08385
G0-opsin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108883411
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Vision
Opsin
108883411
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
TAS2R
Motif
Other DBs
NCBI-GeneID:
108883411
NCBI-ProteinID:
XP_018532030
UniProt:
A0A4W6D675
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Position
LG4:complement(11183750..11189924)
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AA seq
450 aa
AA seq
DB search
MGLLDEDTAFHSNIPVPLDITVAVVYSVFGVCSLFGNSTLLYVSYKKKHLLKPAEYFIIN
LAVSDLGLTLSLYPMAITSSFYHRWLYGKTVCSIYAFCGMLFGLCSLTTLTLLSMVCFVK
VCYPLYGNRFNPVHGCLLIACAWVYALLFACSPLAHWGEYGPEPYGTACCIDWRLSNQHT
TARSYTVALFIFCYILPCCVIVASYTGILITVHTSRKTMEQHASRQTHMSSIQTIIVKLS
VAVCIGFFAAWSPYAVVSMWAAFGQIESIPPLAFAMPAMFAKSSTIYNPIIYLMLRPNFR
RMMRRDMGTLCHACLRSCLCSQCPANCCSKPEIRVRLRTVHRQTDQFPSSNSSAQPPIEA
LKDHSCEKCKDAFECFKHYPQMCGVSNPAANGDLSEDQDTPVPQTHKQKTQSVYHKKSLL
ATMCAKRTSERDNLHINLEMVPGHAKVAWP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggggctgttggatgaagacacggcattccactccaacatacctgtgccactagatata
acggtggctgtggtgtactctgtttttggagtatgttcactgtttggcaacagcacgctg
ctatacgtatcctacaagaaaaagcacctcctcaaaccggccgagtacttcatcatcaac
ctagctgttagtgacctgggcctcactctgtccctttacccaatggcgataacatcaagc
ttctaccacaggtggctgtatgggaaaacagtttgctccatatacgctttttgcggtatg
ctgtttggcctctgcagtctgaccactctaaccctgctaagcatggtgtgctttgtgaaa
gtatgttatccactctatggaaacaggtttaatcctgttcacggatgtctgctgattgcc
tgtgcttgggtctatgccttgttatttgcctgctccccactggcccattggggggaatat
ggaccagagccttacggtaccgcttgctgtattgactggcgcctgtccaatcagcacacc
acagcacgctcctacactgtggcgctgttcatcttctgctacatccttccatgctgtgtt
attgtggcatcctacacaggaattctgatcacagtgcatacatcccgcaagaccatggag
caacatgcgtctaggcagacgcacatgagcagcatccagacaattattgttaagctaagt
gttgctgtctgtatcggtttctttgcggcgtggagtccgtacgctgtggtgtccatgtgg
gctgcttttggacaaattgagagcatccctcctctggcatttgccatgcccgccatgttt
gccaagtcctccaccatctacaaccccatcatctatctgatgctgaggccaaactttcgc
aggatgatgcgcagagacatgggtactctatgccacgcctgtctgaggagctgcctctgc
tcccagtgcccagcaaactgctgctctaagccagagatcagggtcagacttcgcaccgtc
cacagacagactgaccaattcccctcatccaactcctccgctcaacctcctatcgaagca
ttaaaggatcacagctgtgaaaaatgcaaggatgcatttgaatgcttcaaacactaccct
caaatgtgtggtgtcagtaaccccgctgctaacggagacttgtctgaggatcaagacaca
ccagttccccaaacacataagcaaaaaacccaaagtgtgtaccacaagaagtctctgctg
gccaccatgtgtgcaaaaaggacatcagaaagagacaacctccatattaatttagagatg
gttccagggcatgcaaaagtggcttggccctga
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