Lates calcarifer (barramundi perch): 108883436
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Entry
108883436 CDS
T04895
Name
(RefSeq) oxysterol-binding protein-related protein 1 isoform X1
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883436
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108883436
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
108883436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
Ank
Ank_2
Ank_4
Ank_3
Ank_5
PH
Motif
Other DBs
NCBI-GeneID:
108883436
NCBI-ProteinID:
XP_018532081
UniProt:
A0AAJ7LV27
LinkDB
All DBs
Position
LG4:12014695..12034993
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AA seq
975 aa
AA seq
DB search
MEADTLEDQLLLYAKEGSSSHVQRLLQSRIDQSNPLDINCRSRSKASSGWTPIHLACYFG
HRGVVEELLKAGADVNLQNNMGDTALHQAAYTGRKEIVLLLLRYDACASVINGTAQIPKD
VTEDDEIITMLEAAERRETRRREEKLMEAAREGDISTLSKLLSGKDAPNLHCRDSVGNTP
LHCAAYRGQKQCIIKLLKCGASPCIKNSNEQTALDLVRSDELKHIVAAYQDKDVNSGVQK
IEGPLWKSSRFLGWRSHWVVIEDGTLSWYPRQADALAGVRKQGCKSLTRAYCMVKPWDHC
FFMLRCFDDTVHYFKVPSKTNSVATRKKWLDAFEAHSSYSTRHCTQEEIISDGEGDGDVA
VKNLTQAVQAASTCQQKLESEVSIFLSMVKNEENFALAAPLLLKAKETSELSSETCAALN
LCLELLSKQEEVWSLKLEQEVEKNKALTEALQTLATEHHELKQSVSRSRRSSTLSTLTED
DFYDAESESESDLSVSGFLSVASHSCEEDEGRDTPLLSSLRHPSVLRGPTGMSGEGNHGN
QPAQYNGVKKHRMSLPAPMFSRNDVSIWSILKKCIGMELSKIAMPVIFNEPLSFLQRITE
YMEHTYLIHQANATTDSIERMKCVAAFAVSAVASQWERTGKPFNPLLGETFELIRDDLGF
RWVSEQVSHHPPVSAFHAEGLKEDFVFHGSIYPKLKFWGKSIEAEPKGIITLELPKYNEA
YTWTNPTCCVHNIIVGQLWIEQYGNVEVINHKTGERCSMTFKPCGLFGKELHKVEGYILD
KSKKKLCAIYGKWTECLYTVDPATFDAHKKSDKKNSDDKKGSKQSSVDEEPEEMPPPDAE
TVQVIPGSELIWKITPRPENSAKFYAFSTFAMQLNELEKSMEGVIPLTDSRLRPDIRAME
NGDIDLASAEKKRLEEKQRMARKNRTKSTEDWKTRNAALGPRWFQQGPNPHNKAQDWLYT
KGYWDRNYTQLPDIY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagacacacttgaagaccagcttctcctctatgctaaagaaggcagtagctct
catgtccagaggctccttcagtcgaggatagaccaaagcaatcccctcgatatcaactgc
agatctagatctaaagccagttcagggtggacacccatccacctggcctgttactttgga
cacagaggtgttgtggaggagttactaaaggcaggtgctgatgtgaatctgcagaataac
atgggagacacggctctacaccaagcagcctacaccggaagaaaggagattgttctgttg
ctgctgcggtatgatgcctgtgccagcgtaatcaatggaacggctcaaatccctaaggat
gtcacagaggatgatgaaatcattacaatgctggaggctgcagagaggagggagacaagg
cggcgggaggagaagctcatggaagcagccagagagggggacatctcaactctgtctaaa
ttgctcagtggaaaggatgctccaaatcttcactgcagggattctgtgggtaatacaccc
ttacactgtgcagcctacagagggcagaagcagtgcattataaagctgctcaagtgtgga
gccagcccttgtatcaagaacagcaatgagcagacagcactggacctggtccgtagtgat
gaactgaaacacattgtagcagcctatcaagacaaggatgtgaacagtggggtgcagaag
attgaaggccctctttggaagagttcacggttccttggatggcgatctcactgggtggta
attgaggatggaactctctcctggtatcccagacaggcagatgcactggctggtgtcaga
aaacagggctgtaagtctctaacacgagcctactgcatggtcaaaccatgggatcattgc
ttcttcatgctcaggtgctttgatgacactgtgcattattttaaggtcccctcaaagaca
aattcagtggcaacaagaaaaaaatggttggatgcttttgaggcacattcatcctatagc
actcgtcactgcacccaagaggagattatcagtgatggtgagggtgatggtgatgtggca
gtgaagaacctgacacaagcagttcaggcagccagtacttgccaacagaaattggagagt
gaagtgtcgatatttctatccatggtgaagaatgaggagaattttgcattggctgctcct
cttctactaaaagccaaagagaccagtgagctctccagtgaaacttgtgctgctctcaat
ttgtgccttgaactgttgtcaaaacaagaagaggtgtggagcctgaagttagagcaggag
gtggagaagaataaagctctgacagaggctttgcagactttggcaactgagcaccacgaa
cttaagcagtctgtgagcaggagcaggaggtcatctaccctcagtactctgaccgaagat
gacttctatgacgctgaatcagagtcagagtcggacctctctgtgagcggcttcctgtct
gtggccagtcactcctgtgaagaggacgaggggagagacaccccccttctcagcagcctc
cgccatcccagtgtgctcagggggcctaccggtatgtcaggggagggtaaccatggcaac
caaccagcccagtacaatggagtcaagaagcacagaatgtctctaccggctcccatgttc
tccaggaatgacgtcagcatctggagtatcctgaaaaaatgcatcggcatggagttgtca
aaaattgccatgcctgtgatatttaatgagcctctgagcttcctccagcggataacagaa
tacatggagcacacctacctcatccaccaggccaatgccacaacagactctattgagagg
atgaagtgtgttgcagcgtttgctgtgtcagctgtagcatcacagtgggagaggactggg
aagcctttcaacccactactgggggagacctttgagctcatcagagacgatttgggcttt
aggtgggtgtcagagcaagtaagccatcaccctccagtcagtgcctttcatgctgagggc
ctcaaggaggattttgtcttccatggctccatctaccccaaactcaagttttggggaaag
agcatagaagcagagcccaagggaatcatcacactggagctccccaaatataatgaagcc
tacacctggacaaaccccacctgttgtgtccacaacatcattgtaggacagctttggatt
gagcagtatggcaatgtggaagtgatcaatcacaagactggagagagatgcagcatgacg
ttcaagccctgtggcctctttggaaaagagctccataaagtggagggatacatcctagat
aaaagcaaaaagaagctctgtgcaatatatggcaaatggactgaatgcttgtacacagta
gaccctgctaccttcgatgcccacaaaaagtctgacaaaaagaattcagatgataaaaag
ggtagtaaacagagcagtgtggatgaggagccagaagagatgcctccacctgatgctgag
acagtccaggtcatcccaggcagcgagctcatctggaagataacaccccgaccagagaac
tcagccaagttctatgcattctccacatttgccatgcagctaaatgagctggagaaaagc
atggagggagtcattcctctcacagacagccgcctccgacctgacatccgcgccatggag
aatggagatatagatttggcaagtgcagagaagaagagacttgaggaaaaacagaggatg
gcccggaaaaatcgcaccaaatcaacagaggattggaaaacaaggaacgctgcacttggt
ccaaggtggtttcaacaaggacccaaccctcataacaaagctcaggactggctctacacg
aaaggctactgggacaggaactacactcagctgcctgacatctactaa
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