Lates calcarifer (barramundi perch): 108883466
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Entry
108883466 CDS
T04895
Symbol
eif4g1a
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1a isoform X5
KO
K03260
translation initiation factor 4G
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108883466 (eif4g1a)
03012 Translation factors [BR:
lcf03012
]
108883466 (eif4g1a)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108883466 (eif4g1a)
mRNA cycle factors
Stress granule specific factors
108883466 (eif4g1a)
Translation factors [BR:
lcf03012
]
Eukaryotic type
Initiation factors
eIF-4
108883466 (eif4g1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
108883466
NCBI-ProteinID:
XP_018532171
UniProt:
A0AAJ7LVU5
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All DBs
Position
LG4:complement(12641678..12661174)
Genome browser
AA seq
1713 aa
AA seq
DB search
MNKPPQPITGPTSVPNPAPSPGLTQAAYGPGQPPSLVFATPPPPQMNSAPQPRQFAAGPR
TLHQQSYYPNRPTMATSAPRVQTSSGPRPVGPAHVYPPSSQMMMISQQQLSFAGSPQSYF
IPPHGQYRPPYMPPTQQYPVTSGTAGFYPGTSPAEYTTYAGAYYPAQPQYSPSVQPAPVM
ISPAQQQQQAPPPQQPPAQSQGPLKRERKPVVCHNKRAAHLLSEIRIRDPNQGGRDITEE
IMSGGRSTTTPTPPQASIGDGSPAQTNGEVVQPVTPVTRRDENMETPASSETPPPPPATP
NAEPMVESKQEKDTQVTPSAELAAQSVAPTAATEVPSPSIKDQQPPSSLPPAVASTTPPA
EAENTDDTKVGDTVDAPVVPSASLAAQEAPVKMEEPQAAPAPAEKAPEKEERKTEEAMKM
EKEEQVVSSKSEPAVEVEAIVSVAKEETAAKTATEMSQPPHPALEPAAPQTQNAVQSSAP
EPEPTPAEPAEPLLANGLPQDIEELSEDTAVSDTTPLDKPDASQSQEPTPVAKTVTPAQE
EEDEVEVVVEEEEKKKGEEGKEKSEDVPPPSGPTEESTMQAATSVPKKRKNMKELNKKEA
IGDLLDAFTEEQGAKPAPEPSSTQADPVPVAPAEPPAEPADETWEEKEDKQSAEPDRPKA
TPEPTEQKYQYKEEQWKPINPEEKKRYDREFLLGFQFISASMNKPEGLPIISDVVLDKVN
KTPLRPADPSRLMNVGPDFTPSYLGNLGSRSVGGPRGPPPGPRRSQQGQRKEPRKIISSM
SLSDDVQLNKAEKAWKPTVKKGARSRGSEEAEEENSEQVKTQELFKRLRSILNKLTPQKF
QELMKQVTELTIDTEERLKGAIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTSDKPGIY
VNFRKLLLNRCQKEFEKDQDDDEIFEKKQKEMEASKDDEERERLRVELEEARDKARRRSL
GNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMD
QYFNQMDKIIKERKTSSRIRFMLQDVLDLRRNNWVPRRGDQGPKTIDQIHKEAEMEEHRE
QIKVQQQLMSKKEAGGGVGGGRMGGSMGGRGPHTPGGGRVTQPQDEGWNTVPISKNRPID
TTRLSKITKPGALDFNNQLLAPGGKGMWGSWGKGSSGGTGAKPASGEQDSGRPTTSTLNR
FSALQQSGSLLSSADSDRRVPQRSSSSRERGGDRDRGDRERDRFDRFDRSEGREGRDDRS
NRNQITKRSFSRESQERGGRGGDSRATTEPVRRVASMTDDRDRGSRDRGSRDRGSRDRGS
RDRGPSKDLAAKRESAPTPPPSLPKPALSEEEVEKKTNAIIEEYLHINDLKEALQCVAEL
NSASLLYVFVRNGVESTLERSTIAREHMGLLLHQLIKAGTLPTQQYYKGLQEILEAAEDM
AIDIPHIWLYLAELITPMLHEGGIPMGQLFREISKPLVPLGKAAVLLVQILKLLCKGMTP
KKVGAMWTEAGLNWSDFLPKDEDVNKFVTDQKVDFTTGEEMESKEVGKKKVLSGEELSKQ
LDRLLQDKANNQRIRDWVEANLDEEQATSNQFIRALMTSVCQSAIICDNPYRVDARQINQ
RASLLQKYLCDELKELQALYALQALMVHMEQPANLLRMFFDALYDEDVIKEEAFYKWESS
KDPAEQTGKGVALKSVTAFFTWLREAEEESDKD
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccaccacagcctataacgggacccacttctgtcccaaaccctgccccttcc
cctggattaacacaggctgcctacggccccggacagcccccttctcttgtttttgccacc
cctccacctccacaaatgaactctgcgccacagccaagacagtttgctgcagggccccgt
actttacaccaacagagttactatccaaaccgaccaaccatggccaccagtgctccaagg
gtacagacgagtagtggccctcgacctgttggacctgctcacgtctacccgcccagctcc
cagatgatgatgatttcccagcagcagctgtcttttgctggctcccctcagagctacttc
atcccccctcatggacagtaccggcctccatacatgcctcccactcagcagtatcctgtg
accagcggtacagcgggattctacccgggaaccagccctgctgaatacaccacttatgca
ggagcatactacccagctcagccgcagtactctccgtctgtccagcctgcaccagtcatg
atcagccccgcccaacaacagcaacaagccccgcctccacagcaaccaccggcacagtca
caaggcccgctaaagagggaacgcaaaccggtagtgtgtcacaacaaaagagcagcacat
ctcttgtctgagataaggatacgagaccccaaccagggcgggcgtgatatcacagaggag
ataatgtccggtggaaggtccaccaccacaccgactcccccacaggcctccataggtgat
ggaagtcctgcacagaccaacggtgaagtcgtacaacctgtaactccagtaacgagaaga
gatgaaaacatggagacccctgctagctctgaaaccccccctccacctcctgccacacca
aacgcagagcccatggtggagtccaaacaggaaaaggacacccaggtgacaccgtctgct
gaattagccgcacaatctgtagcccccacagctgctactgaggtgccatcaccgtcgata
aaggaccagcagcctccctcttctctccctcctgcagtagcatctactactcctcccgct
gaggcggaaaatacagacgatacgaaagtcggcgacacggtagatgctcctgtcgtcccc
tcagcatcattagccgcacaagaggctcctgtcaaaatggaggagccgcaggctgcccca
gctcctgctgagaaggcaccagaaaaggaggaaaggaaaacagaggaagcgatgaaaatg
gaaaaagaggagcaggtggtcagctccaagtcagagcctgcagtcgaggttgaagcaata
gtcagcgtggcaaaagaagaaactgctgcaaagacagcaactgagatgtctcagcctcca
caccctgccctggaacctgctgctccacagacccagaacgctgtccagagctctgccccc
gaacctgagcccacgccggctgaaccggcagagcctcttctcgccaacggcctccctcag
gacattgaggaactgtctgaggacacggcagtttcagacactacaccccttgacaagcct
gacgcttctcaatctcaggaacccacgcctgtggctaaaacagtgacgccagcccaggag
gaggaggatgaggtggaggtggtggtggaggaggaggagaagaagaaaggggaagagggg
aaggagaaaagtgaggatgtcccccctccctctggtcctacagaggaatctactatgcaa
gctgctacgtctgtgccaaagaagaggaagaacatgaaggagctcaacaagaaggaggcc
atcggagacctcctggatgccttcacagaggagcagggtgccaagcccgctcccgaaccc
tcatccactcaggccgaccctgtccctgttgctccagctgaacctcccgctgagcccgct
gacgagacctgggaagagaaagaggacaagcagagcgcagaacccgacaggcccaaagcc
acacctgagccaactgagcagaaataccagtacaaagaagaacaatggaagccgataaac
ccagaagagaagaagcggtacgacagggagtttctcctgggcttccagtttatcagcgcc
agtatgaacaaacccgagggcctgcccatcatcagcgacgtggtcctggacaaggtgaac
aagactcccctgcggcccgctgacccatcccgactgatgaacgttggtcctgatttcacc
ccctcgtatttggggaatcttgggagcagatcagtgggaggaccacgaggcccgccccct
gggccacgtcgctcccagcagggtcagcgtaaagaacccaggaagatcatcagcagcatg
tccctcagcgatgacgtgcagcttaacaaggccgagaaggcctggaagcccacggtgaag
aagggtgctcgcagccgcggcagcgaggaggccgaagaagagaattcggagcaggtcaag
acccaggagctgttcaagcgcctgcgcagcatcctcaacaagctgacgcctcagaagttc
caggagctgatgaaacaggtgacggagctgacgatagacaccgaggagaggttgaaggga
gccattgacctcatctttgagaaggccatctcagagcccaacttctctgtggcctacgcc
aacatgtgccgctgccttatgggactgaaagtccctacttcagacaaaccaggaatttat
gtcaacttccgcaaactgctgctcaaccgctgccagaaagagtttgagaaggaccaggat
gatgatgagattttcgagaagaagcagaaagagatggaggcttccaaagatgatgaagag
cgtgagcgtctgagggtggagctggaggaggccagagacaaggcccgccgccgctcgctg
ggtaacataaagttcataggcgagctctttaagcttaagatgctgacagaggccatcatg
catgactgcgtagtgaaactactgaagaaccatgacgaagagtctctggagtgtctctgc
aggctgctctctaccattggcaaagatctggactttgaaaaggccaagcctcgtatggat
cagtatttcaaccagatggacaagataatcaaagagaggaagacctcatccaggatccgc
ttcatgctgcaagacgtgttggacctcaggaggaataactgggtgcctcgcagaggagac
caaggtcccaaaacgatcgaccaaatccacaaagaggcagagatggaggagcacagggag
cagatcaaagtccagcagcagctcatgtctaagaaggaggcaggaggaggagtaggagga
ggcaggatgggagggagcatggggggccgtggacctcacacgccagggggcggccgggtt
acccagcctcaggacgagggttggaacacggtgcctatttccaagaacaggcccatcgac
accacccgcctcagcaagatcacaaagcctggtgctctggatttcaacaatcaactgttg
gctccaggaggcaaaggcatgtggggtagctggggcaaaggcagcagtggaggaactgga
gctaagccagcaagtggagagcaggattctggtcgtccaactaccagcaccctcaaccgt
ttctctgcgctgcagcagtctgggtcattgttgtcttcagcagactctgatcgcagagtt
cctcagaggtcaagctccagtcgcgagcgcggtggtgacagagacaggggcgaccgcgag
agggaccgctttgaccgcttcgaccgcagcgagggacgggaaggtcgcgacgacaggagc
aaccggaaccaaatcaccaagaggagcttcagcagggagtcgcaggagcgcggcggcagg
ggcggagacagccgggccacgactgagcccgtgcgccgcgtcgccagcatgactgacgac
agggacagaggaagtcgggacaggggaagcagagacagaggaagccgggaccgagggagc
cgggacaggggtccaagcaaagatctcgcagccaagcgtgagagcgcccccactcctcct
ccttctcttcctaaacccgctttgtctgaggaggaggtggagaagaagacgaacgccatc
attgaagaatacctccacatcaatgacttgaaggaggcgctgcagtgcgtggcggagctc
aacagtgcctcgctgctctacgtgttcgtgcggaacggcgtagagtcgacgcttgagcgc
agcaccatcgccagggagcacatgggcctgctgctgcaccagctcataaaggcggggacg
ttgcccacacagcagtactacaaagggctacaagagatcctggaggcagcagaggacatg
gccatagatatacctcacatctggctctacctggctgaactcatcacccccatgcttcat
gagggaggcatccctatgggacagctcttcagggagatctcaaagcctctcgtgcctctg
gggaaggccgccgtgctgctggtacagatcctcaagttgctctgcaaaggaatgactcct
aaaaaagtcggagccatgtggacggaggctgggctgaactggagtgatttcttgcccaaa
gatgaagacgtcaacaagtttgtcactgatcagaaagtggatttcacaacaggagaggag
atggaatcaaaggaagtgggaaagaagaaggtcctgagtggagaggagctcagcaaacag
ctggacagactccttcaggacaaggccaacaaccagcgaatcagagactgggttgaggct
aacttggacgaggagcaggcgacttccaaccagttcattcgagcgttgatgacatcagtg
tgtcagtctgccatcatatgcgacaacccatacagggtggatgcacggcagatcaaccag
agggccagtctgctgcagaaatacctgtgcgacgagctgaaggagctgcaggccctttac
gccctgcaggctctgatggtgcacatggagcagccagcaaacctgctgcggatgttcttc
gacgccctgtacgacgaggacgtcattaaagaggaggccttctacaagtgggaatccagc
aaagacccagcagagcaaacaggcaaaggtgtggccttgaaatccgtcaccgccttcttc
acctggctccgcgaggccgaggaggagtctgacaaggactaa
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integrated database retrieval system
