Lates calcarifer (barramundi perch): 108883481
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Entry
108883481 CDS
T04895
Name
(RefSeq) ras-related protein Rab-6B
KO
K07894
Ras-related protein Rab-6B
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883481
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108883481
04031 GTP-binding proteins [BR:
lcf04031
]
108883481
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
108883481
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108883481
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
108883481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
SRPRB
MMR_HSR1
FeoB_N
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
108883481
NCBI-ProteinID:
XP_018532197
UniProt:
A0A4W6DV77
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All DBs
Position
LG4:12767928..12774820
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AA seq
208 aa
AA seq
DB search
MSAGGDLGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVI
IMLVGNKTDLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESL
DDANPEGMIDIKLDKPAEPTVPEGGCSC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggaggagatttggggaaccccctgaggaaatttaaactcgtatttttggga
gagcagagcgtggggaaaacatctctcatcactagattcatgtatgacagtttcgacaac
acatatcaggctaccattggaattgacttcctatcaaagacgatgtacttggaagaccga
acagtaaggctccagctgtgggacacagctggacaggaacgtttcaggagcctcatcccg
agctacatacgtgactctacagtagctgtggtcgtctatgacataacaaatgtgaactca
ttccagcagacctgcaaatggattgatgatgtcaggacagagagaggaagtgatgtcatc
atcatgctagtcggcaacaaaacagatctggaggagaagaggcaaatcacgatcgaggaa
ggagagcagagagccaaagagctgaacgtcatgttcatcgagaccagtgccaaaacaggc
tgcaatgtcaaacagctgtttcgtcgggttgcagcagccctacctggaatggaaagcttg
gacgatgcaaatcctgaaggcatgatcgacatcaagctggacaaaccggcagagcctact
gtccccgagggcgggtgctcatgttaa
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