Lates calcarifer (barramundi perch): 108883513
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Entry
108883513 CDS
T04895
Name
(RefSeq) exostosin-like 2
KO
K02369
alpha-1,4-N-acetylglucosaminyltransferase EXTL2 [EC:
2.4.1.223
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108883513
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108883513
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
108883513
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108883513
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Glycos_transf_2
Glyco_tranf_2_3
CCER1
Motif
Other DBs
NCBI-GeneID:
108883513
NCBI-ProteinID:
XP_018532251
UniProt:
A0A4W6E1Z7
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Position
LG4:13363062..13366164
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AA seq
348 aa
AA seq
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MRIPRWCMGLRRTYLVWPILLILLVGAALTALLPPAEDQGGLAVLGVLRRATSQKEKPAQ
GHHGDSTEGDHKFTIIIQTYNRTDILLKILNHYQAVPHLQQIIIVWNNVGEQTPLKLWNS
LGPHPVPVVFKEQTSNRMRNRLQPFPEIDTDAVLMLDDDTLVSVPDISFAFSVWKQFPDQ
IVGFVPRKHVSTPGGVYSYGSFELQDPEMAGGDKYSMVLIGAAFFHHRYLQLFQDQPQAV
HALVDETQNCDDIAMNFAVAQYLRKPFQSIGSINKPSGVFVKPVDLRNLEKEASSGYQGM
WHRPEHLLQRSYCLNRLTQIYGFMPLCFSNLMVSQFGFPSYANHKTRG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcccccgttggtgcatggggctccggcgaacttatttggtttggccaatcttg
ctgatcctcctggttggtgcagccttaacagctctgctgccccctgcagaggaccaaggg
ggccttgctgtccttggagtgctacgcagggcaacatcacaaaaagagaaaccagcacag
ggccatcatggtgacagcacggagggagatcataagtttactattatcattcaaacgtat
aatcgcacagacattctgctcaaaatacttaaccattaccaggcagtgcctcatcttcag
cagattattatagtttggaacaacgttggggagcagacacccctaaaattatggaactcc
ttggggcctcatccggtccctgtagtcttcaaggagcagactagcaatcgaatgcgcaac
agactacaaccattccctgagattgacactgatgctgtgttaatgcttgatgatgacact
ctggtcagcgttcctgacatcagttttgctttctcggtctggaagcaatttccagaccag
attgttggatttgtgcctcgaaaacatgtctcaacaccaggaggagtgtacagttatggc
agctttgaactgcaggatccagaaatggcgggaggtgacaaatactccatggtgttaatt
ggcgctgcttttttccaccaccgctacctgcagctcttccaggaccaacctcaggcagtg
catgcactagtggatgaaacacagaattgtgatgacattgccatgaactttgctgtggca
cagtatttgaggaaaccctttcagtccataggcagcattaacaaaccctctggggtcttc
gtcaaacctgtggaccttcgcaacttggaaaaggaagccagcagtgggtaccagggtatg
tggcatcgtccagaacaccttctccagaggtcctactgtctgaacaggctgacacagatt
tatggcttcatgccgctctgcttctccaacctgatggtctcccagtttggcttccctagc
tatgccaaccacaagactagaggctga
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