Lates calcarifer (barramundi perch): 108883526
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Entry
108883526 CDS
T04895
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00061
Fatty acid biosynthesis
lcf00071
Fatty acid degradation
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04146
Peroxisome
lcf04216
Ferroptosis
lcf04920
Adipocytokine signaling pathway
Module
lcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108883526 (acsl3b)
00071 Fatty acid degradation
108883526 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108883526 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
108883526 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108883526 (acsl3b)
03320 PPAR signaling pathway
108883526 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108883526 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108883526 (acsl3b)
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108883526 (acsl3b)
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108883526 (acsl3b)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
108883526 (acsl3b)
Exosomal proteins of breast cancer cells
108883526 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108883526
NCBI-ProteinID:
XP_018532280
UniProt:
A0AAJ7LW76
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All DBs
Position
LG4:14012337..14023871
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AA seq
711 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFIPWYFFSGAGTNLDRARRIKARTVSGHPAGPYR
AINSQQKLVAWLHPGVDTLDKMFEHAAGRFPQRDCLGTREVLSEEDELQPNGKVFKKVIL
GNYNWLSYAEAYEAAKCFGSGLAALGQRPQCNIAIFCETRAEWIVAAQACFMYNFPLVTL
YATLGPMAIAHGLNETEVTHIITSKDLLQSRLKAILCDVPRLRYIIVVDSKPTSWPDIPR
GIMVLNMDAVKEMGSRPDNIAVDRRQPQSSDIAVIMYTSGSTGIPKGVMISHGNIIAGIT
GMAERIPDLNETDTYIGYLPLAHVLELSAELVCISHGCRIGYSSPQTLADQSTKIKKGSK
GDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSKLQKTLFVLAYNYKMEQISKGYSTPLC
DSLVFKRVRALLGGNTRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGTISEV
WDYSTGRVGAPLVCSEITLKDWEEGGYYSTDKPNPRGEILIGGPNVTMGYYKNEAKNRED
FYVDENGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCPLIDN
ICAYANSDQSYVISFVVPNHKQLMALAEQMQVRGTWEEICNNSQMEKEVLRIITEAAISA
KLERFEIPKKIRLSSEPWTPETGLVTDAFKLKRKELKTHYQEDIERMYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggacatgaaccccctgttgctccaggtcttccgttctgtggtctgg
gtctactctgtcatcaccttcataccctggtacttcttctcgggagcaggcaccaatctg
gatcgtgctcgtcggatcaaggcacgtacggttagcggacacccagcggggccttacagg
gccattaatagccaacagaagctggtagcatggctgcaccctggggtggacaccctggac
aaaatgtttgaacacgctgctgggaggtttccacagagagactgtctgggcaccagggag
gtgctcagtgaggaggatgagctccagcctaatgggaaggtcttcaagaaggtaattctg
gggaactacaactggctgtcgtacgcggaagcctacgaggcagcaaagtgtttcggcagt
ggcctcgcagctctcgggcagaggcctcagtgtaacatcgccatcttctgtgagaccaga
gcagaatggattgtggcagcacaagcctgcttcatgtacaatttcccacttgtgaccctg
tatgccactcttggacccatggccatcgctcacggcctgaacgagactgaggtcacacac
atcatcacaagcaaagacctgcttcagagccgacttaaggccatactttgtgatgtgccg
aggctacggtatatcattgtagttgacagtaagcccacaagctggccagacatccccaga
ggcatcatggtcctcaacatggacgctgtgaaggagatgggatccaggcctgataatata
gcagttgaccgcagacagccacagtcctcggacatcgccgtcatcatgtacaccagcggc
tccacaggcatccccaagggtgtcatgatctcccatggcaacatcattgctggcatcact
ggcatggctgagcgaatccctgacctcaatgagacagacacctacattggctacctgccg
ttggcccatgttctagagctcagcgctgaactggtgtgcatctctcatggctgtcgcatc
ggctactcctcccctcagactctagctgaccagtcgaccaaaataaagaagggcagtaaa
ggggataccagtgtgctgaaacctactctcatggctgccgtaccagagatcatggatcga
atctacaagaatgtgatgacaaaagtggaggagatgagcaagctccagaagacgctcttt
gtgctggcttataactacaagatggagcagatctctaagggctacagtacgcctctctgt
gacagtctggtgttcaaacgggtgcgcgcgctcctgggagggaacacgcgggtgctgctt
tctggcggtgctccactctcggctgccacacagcgcttcatgaacatctgcctgtgctgc
cccgtggggcagggctacggtttgacggagacctgtggagctggcaccatcagtgaggtt
tgggactacagcacgggacgggtcggtgctccgcttgtttgttcagagatcacactcaag
gactgggaggagggtggttactacagcacagacaagcctaacccacggggagaaatcttg
atcggggggcccaacgtaacaatgggttactacaaaaacgaagccaagaaccgcgaggac
ttttatgtggatgagaacggccagagatggttctgcaccggagacattggagagttccac
ccggacggctgcctcaagatcattgaccgtaagaaggacctggtgaaattgcaggcaggc
gagtatgtctctctaggaaaagtggaggctgttctgaagaactgccctctcattgacaac
atctgtgcctatgccaacagtgaccagtcgtacgtaatcagctttgtggtgccaaaccac
aagcagcttatggcactggcggagcagatgcaggtgaggggcacatgggaggagatctgc
aacaactctcagatggagaaagaggtcctccgcatcatcactgaggctgctatctcagca
aaactggagcgatttgagatccccaagaagatccggctgagttctgagccctggacacca
gagaccggcttggtcactgatgcattcaaactgaaacgcaaggagctcaaaacacactac
caggaagacattgagaggatgtacggaggaaaataa
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