Lates calcarifer (barramundi perch): 108883527
Help
Entry
108883527 CDS
T04895
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a isoform X1
KO
K09381
paired box protein 3/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883527 (pax3a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108883527 (pax3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108883527
NCBI-ProteinID:
XP_018532282
UniProt:
A0AAJ7PMD2
LinkDB
All DBs
Position
LG4:complement(13981756..14000488)
Genome browser
AA seq
488 aa
AA seq
DB search
MTALAGGLPRMMRPAPHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTATPEVDKKIEE
YKTENPGMFSWEIRDKLLKDGICDRNNVPSVSAISRIMRSKFGGVGDDEEDDDEVVKREM
EENEPRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SGLQPYQLSDSPYPPTSIAQAASEQPSTVHRPQPLPPTSVHQSGLSSSAGSQDGSSAYCL
SSGRHGFSGYSDGFVAPTAHSNAVNPTISNSLSPQVMGLLNPGGVPHQSQSDFALSPLTG
GLEPNGAMAASCHGSQRLEALPGLSSMPALPSTQSYCPPSYTSPAYAVDHHPSYQYGQYG
QSKVPFII
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcttgcaggaggtttaccgagaatgatgagaccggctcctcaccagaactac
ccgcggggtggatactctctggaagtctccactcccttaggacagggtcgggtcaaccag
ctcggtggtgtcttcatcaacggcagacctctccccaaccatattcgccataagatcgtg
gagatggcccatcacggtatccggccgtgcgtcatctcccgtcagctgcgggtgtcccac
ggctgcgtctccaaaatcctctgccggtaccaggagactggatccatcaggccgggggcc
atcggaggcagcaagccaaagcaaactgctactccagaggtggacaagaaaatcgaggag
tacaagacagaaaacccgggcatgttcagctgggaaatcagggacaaactactgaaagat
gggatctgcgacaggaacaatgtcccctcagtgagcgccatcagccgcatcatgcgctca
aagttcggcggagtcggtgacgatgaggaggatgatgatgaggtggtaaagagggagatg
gaggaaaacgagccgcggacaaaacacagcatcgatggcattctgggagacagatccagt
cactcggacgagggctctgatgtggactcagagccgggcttgcccctgaagaggaagcag
cgccgcagtcggaccaccttcacagcggagcagctggaggagttggagagggccttcgag
cgtacgcactaccccgacatctacacgcgggaagaactggcccagcgggccaaactgaca
gaggctcgagttcaggtgtggttcagcaacagaagagcccggtggaggaagcaagctgga
gccaatcagctgatggcttttaaccacctcatccccggtggcttccctccatcagctatg
tcaggcctgcagccctatcagttgtccgacagcccctaccctcctacttccatagctcaa
gcagcatccgagcagcccagcacagtccaccgaccgcagccgctgccccccacctctgtg
caccagagcggcctcagctcgtcggcgggatcccaggatggaagctctgcatactgcctg
tcctctggacgccacggtttctcaggatactcagacggctttgtggccccgacagcgcac
tccaacgctgtcaaccccaccatcagcaacagcctctcaccacaggtgatgggtctattg
aacccaggtggagtgccacatcagtcccagagtgactttgccctctccccactgaccgga
ggcctggagcctaatggagccatggccgccagctgccatggctcccagcgcctggaggct
ctacccggcctgtccagtatgcccgccctgcctagcacccagtcttactgcccaccttcc
tacacctccccagcctacgctgtggaccaccacccatcctaccagtacggacagtacggt
cagagcaaggtgcctttcattatatga
DBGET
integrated database retrieval system
