KEGG   Lates calcarifer (barramundi perch): 108883529
Entry
108883529         CDS       T04895                                 
Name
(RefSeq) cullin-3
  KO
K03869  cullin 3
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04120  Ubiquitin mediated proteolysis
lcf04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108883529
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    108883529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108883529
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108883529
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     108883529
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108883529
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 108883529
NCBI-ProteinID: XP_018532287
UniProt: A0A4W6E785
LinkDB
Position
LG4:complement(14046107..14054801)
AA seq 766 aa
MSNLKGPSKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLDGRSVYEEDFEGPFLDMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLGRRLLSNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHIQTTSASLSGVDLTVRVLTTGYWPTQSATPKCTIPPAPRHAFEVFRRFYLAK
HSGRQLTLQHHMGGADLNATFYGAIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKCTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcccctccaagaaggacaccaagatgaggatacgagcctttcct
atgactatggatgagaagtatgtgaacaacatctgggaccttctaaagaatgccatccag
gagattcagaggaagaacaacagtggactaagctttgaggagctgtacaggaacgcctac
accatggtgctccacaagcatggggagaagctctacacaggcctgagggaggttgtcaca
gagcacctcatcaacaaagtacgggaagatgtcctgaactctttaaataataactttctg
caaacattgaaccaggcgtggaatgaccatcaaactgccatggttatgattagagacatc
ctcatgtacatggaccgggtctatgttcaacaaaacaatgtggagaatgtgtacaacctc
ggcctcatcatattcagggaccaggtggtgcgctatggctgcatcagagaccacttacga
cagacattactggacatgattgcacgtgagaggaagggagaggttgtagacaggggggcc
atcagaaatgcctgccagatgctaatgattctcggcctcgacggcagatctgtatatgaa
gaggactttgagggacctttcttagatatgtcagctgaattcttccagatggagagccaa
aagttcctagctgaaaacagtgccagtgtctacataaagaaggtagaggccagaatcaat
gaagagattgagcgagttatgcactgcttggacaagtctacagaggagcccattgtcaag
gtggtggagcgggagctaatttctaaacacatgaagaccattgtagagatggagaactct
ggccttgtgcatatgctaaagaatggcaaaacagaagacctggcttgcatgtacaagctg
ttcagtcgtgtgccaaatggcctgaaaacaatgtgcgagtgtatgagctcttacctgaga
gagcaaggcaaagctctggtgtcagaagagggagagggcaagaaccctgtcgactatatc
cagggcctgctagacctgaagacacgatttgatcgcttcctcctggagtccttcaacaat
gacagactcttcaaacaaaccatagctggagactttgagtatttcctcaacctcaattcc
cgctctccagagtacctgtcactcttcattgatgataagctcaagaagggagtcaaaggg
ttgacagaacaggaggtagagtcaatccttgacaaggccatggtgctgttcaggtttatg
caggagaaggatgtgtttgaaaggtactacaagcagcatctgggtcgcaggctgctcagc
aacaagagtgtctcagacgactcagagaagaacatgatctctaagctcaagacagaatgt
ggctgtcagttcacctcgaaactggaagggatgtttagagacatgagcatctccaacacc
accatggatgagttcaggcaacacatacaaactacgtcggcatctctaagtggtgtggac
ctcacagtaagagtcctcactactggctactggcccacacagtctgcaacccccaaatgc
accatcccccctgctcctagacacgcctttgaagtttttagaaggttttacctcgccaag
cacagtggcagacagctcacactgcagcaccacatgggtggggcagacctaaacgcaact
ttctatggagctattaaaaaggaggatggttcagaagtgggtgtgggaggtgcccaggtg
acaggctctaacaccaggaagcacatattgcaagtctccaccttccagatgactatcctc
atgctcttcaataacagagaaaagtgcacttttgaggagatccagcaggagacagatatt
cccgagcgggagttagtgcgagcactgcagtctttggcctgtgggaagcccacacagaga
gttctcaccaaggagccaaagtccaaggagattgaaaacggccacgtgtttacagtcaat
gatcagtttacttccaaactgcacagagtcaaaatacagacagttgctgctaaacaaggt
gagtcggaccccgaaaggaaagagacgcggcagaaagtggatgacgacagaaagcatgag
atagaggcagccattgtccgaatcatgaagtcgaggaagaagatgcagcacaatgtcttg
gtggcggaggtgactcagcagctccgggcacgcttccttcccagtcctgtggtaattaaa
aagcgtatagaaggactaatagaaagagaatacttggcgaggacaccagaggatcgtaaa
gtgtacacctatgttgcatag

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