KEGG   Lates calcarifer (barramundi perch): 108883562
Entry
108883562         CDS       T04895                                 
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108883562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108883562
Spliceosome [BR:lcf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    108883562
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 108883562
NCBI-ProteinID: XP_018532383
UniProt: A0A4W6EAB1
LinkDB
Position
LG4:complement(14543921..14549190)
AA seq 468 aa
MANIGNQLPTQAVSKPAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPTDLIEWYDGFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKIIDQQIKARPRKVAQKETQEEEATFTESGRQGERR
RSRTPRRTPSPRRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKEREGRDRDRDRDR
GDRGDRERRRSRSAERNQDRRERRRSRSGSRERRNERRDKERDGGDDRSRRKDRDHHKDR
GTERERSRDKKSRGETDDRRHKDDRERHREERKAKRSSRSRSRERKHKSGEEKSRKRERS
HSRDRDRERDGEQRSHKRSRSKERSHHQRESSNDHSKHSERRRSQSTE
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctaacatcgggaaccagctaccaacacaggccgttagcaagcctgcaccaggaaaa
catggaaatgtactgcctctgtggggcaacgaaaagactatgaacctcaatccaatgatt
cttaccaatgtgctgtcctcgccgtatttcaaagttcagctttatgaactaaagacctac
cacgaagttgtggacgaaatctatttcaaggtgactcatgttgagccttgggaaaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcgtggagttgggactggt
ggtattgtgtctactgctttctgtcttctatacaaactgtttacgctcaagctgactcgt
aaacagctgatgggtctgatcactcacacagactctccatacataagagcacttggcttc
atgtacataagatacactcagcctccaacagatttgattgaatggtacgatggcttcctg
gatgatgaggaggagcttgacgtgaaggcaggaggtggctgcgtgatgaccattggagaa
atgctacgctccttcctgaccaaactggagtggttctccactcttttcccccgtatccca
gtgcctgtgcagaagattatcgaccagcagataaaggcaaggcctcgcaaggtcgctcag
aaagagacacaggaggaagaggccacgttcacagagtcagggaggcaaggggagcggcgc
cgctccaggactcccagacggacaccgagcccccgaaggtcgcccaaacggtcaaggagc
aggagccaccaccgcgagagggaccgccacggccccagcttcgaccgagagctggagagg
gagcgtgaccggcaaaggaaggagagggagggcagggaccgcgatagggacagagacagg
ggggaccgaggggacagggagaggcggcggtcgcgcagcgcagagaggaaccaagaccgg
cgagaacgcaggagaagtcgcagtggcagccgggaacgaagaaacgaacgcagagacaaa
gaaagagacggcggggatgacaggagcaggagaaaggacagggatcaccataaagatagg
ggcacagagagggagaggtccagggacaagaagagcagaggagagactgacgacaggagg
cataaagacgacagggagaggcacagggaagagaggaaggccaagaggtcgagccggagt
cgaagcagggagaggaagcacaagagtggggaggagaagagcaggaaaagggagcgcagc
cacagcagagatagagacagggagcgagacggagagcagcgttctcacaaacgtagtcgt
agcaaagagaggagtcatcatcagcgtgagtccagtaatgaccatagtaaacatagtgaa
cgcagaaggagtcagagcactgagtaa

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