Lates calcarifer (barramundi perch): 108883585
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Entry
108883585 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883585
04121 Ubiquitin system [BR:
lcf04121
]
108883585
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108883585
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108883585
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108883585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
DUF7560
Motif
Other DBs
NCBI-GeneID:
108883585
NCBI-ProteinID:
XP_018532433
UniProt:
A0A4W6EAI0
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Position
LG4:14823395..14829288
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AA seq
353 aa
AA seq
DB search
MVMLRRSWYVSVFIASFPLQKSGLVVPSCYPSVPYELVSCLEMAEAPPRPCRFFCHRCSA
EISPRLPDYTCPRCESGFIEELPEERSTENGSASTSSTSDQSRSAFENMDHQHLFTFPSG
YGPFALGIFDENFDLRTRLPTEDNRETENRREREMASRQRYSARQPRGRHVPRRQGTRHE
GVPTLEGIIQQLVNGIIAPTAMPNIGMGPWGMLHSNPMDYAWGANGLDAIITQLLNQFEN
TGPPPADRERIKSLPTISITEEHVGAGLECPVCKEDYSVEESVRQLPCNHLFHNDCIVPW
LEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSPSSPSNENAASNS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgctacgtaggagctggtacgtttccgttttcatcgcgtctttcccattgcaa
aagtcaggtcttgttgtcccttcttgctatccgtccgtaccgtacgaattggtctcctgc
ttagaaatggctgaagctcccccacggccctgccggtttttttgtcaccggtgttcagca
gagataagtccgcgtttaccggactacacctgtccacgctgtgaatctggcttcattgag
gaattgcctgaggaaagaagtactgaaaatgggtccgcatccacatcctccaccagtgat
cagagccgctcagcctttgagaacatggatcaccaacatttattcacatttccctctggg
tatggccccttcgcactcgggatctttgatgaaaactttgaccttcgaacgcggctaccc
acagaggacaaccgagagacagaaaacaggagagaacgggaaatggcctcacggcaacga
tacagtgcgcggcaaccgcggggtcgacatgttcctcgacgacagggtacgcgccatgaa
ggagtgcccacattagagggaatcatccagcagctagtaaatggaatcatagcacctaca
gccatgccaaatattgggatgggaccatggggcatgctacattccaatccaatggactat
gcctggggcgccaatggacttgatgccatcattacacagttattgaaccagtttgaaaac
acaggtccacctcccgcagacagagagaggataaagagtttacccaccatctccatcaca
gaggaacatgttggtgctggtttagagtgtcctgtgtgcaaagaggactacagcgttgag
gagagtgttagacaactaccatgcaatcatttgtttcacaatgactgtatagtaccatgg
ctggagcagcacgatacgtgtcctgtgtgcaggaagagtcttagtggacagaacacagcc
acagatccaccagggttatcaggaatgaacttctctccctcctcctcctcctcttcctcc
ccgagttcacctagcaatgagaatgctgccagcaactcatag
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