KEGG   Lates calcarifer (barramundi perch): 108883591
Entry
108883591         CDS       T04895                                 
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108883591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108883591
Spliceosome [BR:lcf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108883591
 Complex B
    108883591
 Complex C
   U2 SnRNP specific factors
    108883591
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 108883591
NCBI-ProteinID: XP_018532448
UniProt: A0A4W6DAU5
LinkDB
Position
LG14:6494272..6501322
AA seq 867 aa
MASDGPPGTESLPSDLGSAIAGLNTWSNPELQAKLAELGAPTMGPREELIDRLKGYMMQT
GILLSKPNDDKSMGSQMQGIPPMPPMPMPPMPPGIGMLQAMSMMPGGPPPPGIHMGMEPP
GLPPPGLSQEDQLKMVQQRAAMVLQQEERAKQQGDSRVMDEQDLLEQQKRAAVLLEQERQ
QEMAKMPRAMPAVRGLDPRGPLPPGVTMMPTQKQRVPPPPGEDNREAWQSEEVSVSGPKI
PQALEKILQLKEIRQEQLTDPTEGEEEDDEGADMDLTNSSGPVMSETEDDDSQMSKKDKN
RKRRNRKKKSKKKRALEKKEQAEQEQQKKEGGEKEKEKEPEVEIEYVTEEPEIYDPNYIF
FKRIFEAFKLTDDVKKEKEKEPEKAEKQETAVLRKKGFEEEKKDSDESDEEIRPDAPKLS
KKKLRRMNRLTVAELKQLVARPDVVEMHDVTAQEPKLLVHLKATRNTVPVPRHWCFKRKY
LQGKRGIEKPPFELPEFIKRTGIQEMREALQEKEDAKTMKTKMREKVRPKMGKIDIDYQK
LHDAFFKWQIKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRIALGMPVGPNAHKVPP
PWLIAMQRYGPPPSYPNLKIPGLNSPIPENCTFGYHAGGWGKPPVDEMGKPLYGDVFGTN
AADFQAKAEEEEVDHTPWGELEPSDEESSEEEEEEESDEEKPDETGFFTPADSGLITPGG
FSSVPAGMETPELIELRKKKIEEAMDGNETPQLFTVLPERRTGSVGAAMMASTHIYDMSG
AMAARKAGGGQESQGVEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHA
AKQKQKKRKAQPQDTRGGAKKYKEFKF
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggcctccgacggaccaccgggtaccgaatccctcccgtccgatttggggagtgctatt
gcgggtttgaacacatggagcaacccggagcttcaggcgaagctggcggagctaggagcg
cccacgatgggccccagagaggagctgattgacagactgaagggatacatgatgcagact
gggattctcctcagcaaacctaatgatgacaaatcaatggggtcccagatgcaaggtatc
cctcctatgcccccgatgccaatgccacccatgcctcctggtataggcatgctccaggct
atgagcatgatgcccggagggccccctccacctgggatacacatgggcatggagccccca
ggtttgccccctcccggcctgtcgcaggaggatcagctgaagatggttcaacagagagca
gccatggtgttacagcaggaggagagggccaagcaacagggtgattccagagtcatggat
gaacaggatcttcttgagcagcagaaaagagctgcagtgctgctggaacaagaacgtcag
caggagatggccaagatgcccagggccatgcctgctgtgagaggtttggatcctcgtgga
ccgctgcctcctggtgtgactatgatgccgacccagaaacagagagtgccacctcctcca
ggagaggacaacagagaggcctggcagagcgaggaggtgagcgttagtgggcccaagatc
ccccaggctctggagaaaatcctccagctgaaggagatcaggcaggagcaactcaccgac
cccacagaaggggaggaggaggatgatgagggagcagatatggacttgaccaactcctct
ggtcccgtcatgtctgagacagaagacgatgacagccaaatgtccaagaaagataaaaac
cgcaaacgcaggaaccgcaagaagaagagcaagaagaagcgagctctggagaagaaggag
caggcggagcaggagcagcagaagaaggagggtggcgaaaaagagaaggaaaaagagcca
gaggttgagatcgagtacgtcacagaggagccagagatttacgaccccaactacattttc
ttcaagaggatcttcgaggcgttcaagctgacggatgatgttaagaaagagaaggagaag
gagcctgagaaggcggaaaagcaggagacagccgtgctgcggaagaagggatttgaggag
gagaagaaagacagcgatgaaagtgatgaggaaatcagaccagatgcacctaaactgtcc
aagaagaagctgaggaggatgaacaggttgactgtggctgaactcaagcagctggtggct
cgtccagatgtagtggagatgcatgatgtgacggcccaggagcccaagctgctggtccac
ctaaaggccaccaggaacacggtgcccgtgccccgccactggtgcttcaaaaggaagtat
ctgcagggcaagagaggtatagagaagccgccgttcgagctcccagagttcatcaagaga
acaggaatccaggagatgagggaggccctgcaggagaaggaagacgccaaaaccatgaaa
accaaaatgagagagaaggttcgccccaagatgggaaagatcgacatcgactaccagaag
ctccacgacgctttcttcaaatggcagatcaaacctaagctcactatccatggagacctg
tactacgagggtaaagagttcgagactcgtctgaaagagaagaagccaggcgatctgtct
gatgagctgcgtatcgctctgggcatgccggtcggacctaatgcccacaaggtgcctcct
ccctggctgatagccatgcagaggtatggtccccctccttcctaccccaacctcaagatc
ccaggactcaactctcccattccagagaattgtacgtttgggtaccacgccggaggctgg
gggaaaccaccagtagatgaaatgggcaaaccactttacggcgacgtgtttggaaccaat
gctgcagacttccaggctaaagcggaggaggaggaggtggaccacacaccgtggggagag
ctggagccttcggacgaggagtcatcagaggaagaggaggaggaggagagcgacgaggag
aaaccagacgaaaccgggttcttcacaccagcagacagcggactcatcacccctggaggc
ttctcatcggtgcccgccggcatggagacgccagagctgattgagttgaggaagaagaag
atcgaggaggccatggacggaaatgagacgccacagctgttcacagtgcttcctgagaga
cgaactggctccgtaggagcagcaatgatggcctcaacacacatctacgacatgtcaggg
gccatggcagctcgtaaggcgggcggagggcaggagtctcagggtgtagaggtggccctg
gccccagaagagttggagctggatcccatggccatgacccaaaagtacgaggagcatgtg
agggagcagcaggcccaggtggagaaggaggacttcagtgacatggtggctgagcacgct
gccaagcagaagcaaaaaaagaggaaggcccagccgcaggacacacgaggcggtgcaaag
aaatacaaagagttcaagttctag

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