Lates calcarifer (barramundi perch): 108883595
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Entry
108883595 CDS
T04895
Name
(RefSeq) hepatocyte nuclear factor 6
KO
K24171
one cut domain family member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108883595
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
108883595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108883595
NCBI-ProteinID:
XP_050926038
UniProt:
A0AAJ8DPD8
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Position
LG4:complement(14987934..14998951)
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AA seq
459 aa
AA seq
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MELTMENLHSVSSHSQAGDLMSSPHVRPSPSPSSTPRNLVSHAPGARSAMVSGMASLLES
SAGDYRTDPSALSGHLHPSISMCETGMSLSNTYTTLTPLQHLPPISTVSDKFHHPHSHHH
AAAHQRLSAGNVSGSFTLMREDHRGLASMGNLYSHYPKEMSVSGMGHGSLSPLSSGLSSL
HNSQQPLSAYGPSAHLSTDAKMLSPVSGFESHASMLSRSDQEHLARSLGGHGHGMISNLN
GMHHHPHSHLHSQANGAVMLGDRERHGHGAGQGVAGSGIQAEEINTKEVAQRITAELKRY
SIPQAIFAQRILSRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
ACKRKEEDRGRERSQVPKKQRLVFTDLQRRTLVAIFRENRRPSKEMQVTISQQLGLELST
VSNFFMNSRRRCPDRWDTEEPNASPIQPGTSSATTFSKA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaccatggagaaccttcacagcgtgtcctcgcactcccaggcgggagacctc
atgagctctccgcacgtgcggccgtcgccgtcccccagctccactccccggaatctggtc
tcgcacgctcccggcgcgcggtcagccatggtctctggcatggcctcgctcctggagagc
tccgccggggactaccggacagacccgtccgctctgtccggccacctgcacccgtccatc
agcatgtgcgagaccgggatgagccttagcaacacgtacaccaccctgacccccctgcag
catctacctccgatatccaccgtctcggataagtttcaccacccgcactcacaccaccac
gctgccgcccatcagcgactctccgccgggaacgtcagcggtagcttcacgttgatgcgg
gaggaccaccgggggctcgcctccatgggcaacctgtacagtcactatcccaaagagatg
tccgtgtccggcatgggccacggctcgctctccccgctgtccagcgggctgagctctttg
cacaactcccagcagccgctctcggcgtacggtccgagcgcgcacctctccaccgacgcc
aagatgctctccccggtgtcagggttcgagtcccacgcctccatgctgtcccggagtgac
caagagcacctggcaaggagtttaggaggtcacggccacggcatgatctccaacctcaac
ggcatgcaccatcacccgcacagtcacctccattcccaggcgaacggcgctgtgatgctc
ggggaccgggagaggcacggccacggggccggccagggagtagcagggtcggggatccaa
gctgaggagatcaacacgaaggaggtggctcagaggataacggccgagttaaagcggtac
tccatcccgcaggccatattcgcccagaggatcttgagccggtcgcagggaaccctctca
gacctgctacggaaccccaaaccctggagtaagctcaagtcaggccgggagaccttcagg
aggatgtggaagtggctgcaagagcctgagtttcagcggatgtctgctctccgcctggcc
gcatgtaaacgcaaggaggaggaccgaggacgagaacgcagccaggtgccaaagaagcag
cgactggtcttcaccgacctgcagcgtcgcaccttggtagccatcttcagagagaaccgc
cgcccctccaaagagatgcaggtcaccatctcccagcagctcggcctggagctctccacc
gtctccaacttcttcatgaactcacgccgccgctgtccggaccgctgggacacagaggag
cccaacgcctcacccatccaacctggtacctcctctgcaaccacgttctccaaggcctga
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