Lates calcarifer (barramundi perch): 108883601
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Entry
108883601 CDS
T04895
Name
(RefSeq) protein unc-13 homolog A
KO
K15293
protein unc-13 A/B/C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108883601
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108883601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
Exo70_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108883601
NCBI-ProteinID:
XP_018532456
UniProt:
A0AAJ7LWN3
LinkDB
All DBs
Position
LG4:complement(15070921..15103492)
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AA seq
1878 aa
AA seq
DB search
MSLLCVGVKKAKLDGPQEKFNTYVTLKVQNVKSTTIAVRGNLPSWEQDFMFEINRLDLGL
TVEVWNKGLIWDTMVGTVWIPLHSIRQSNEEGPGEWLTLDSQVIMSDNEICGTKDPTLHL
VLLDTRFELPLDIPEDEARYWAKKLEQLNAMRDQDYSYQEEQERPLRVPGTQCCNWSLWG
DQQNEDPDSAVDDRDSDYRSETSNSIPPPYYSTSQPNASVHQYPISHQHRNIRSYSYPRS
GNGHDLDYHHQRTVSPTGSYASSAELSRCSSQLSEEDYGGEYGERDPYDENDSYHSCHSS
VSYSKGSPDWDPDETQGAYSDEGGYSKDGGEEVALYEEDDGGLYEGEEDGLYEDEEMMYD
DEDLYNLDGTLSEDMEPPFTPTPTSTAPPTLDVPSSRPPLEKQPSLHQQQQQPSTQPSNQ
TSNQAHPPGMAPAAQPPSGQPTAQPPKQPQPQTQPQPQPAPSATSFFSMAKPLTAAVTGL
ASTFLSSVPTAQPAQSHPPASAVSQQHQSTAANSVPPSHPATMANSASQPPSSAMGPSSQ
QIPSSAQPQSQVSDPATTQSAAPEDQAPQLEEEPWLEEDMMLEKEARTPPAQAEEKLSVE
EKEEKFEESRPPTPVELEEMPPESPPVIEEPKEPVDPAVRAKENWLRLYNKVLEQLREAR
GETSSSLWFGKGGMGGALYSIDSMPDLRKRKAIPLVRDLAMSLVQNSRKAGITSAMASTT
LGNEELKSHVYKKTLQALIYPISSTTPHNFEVWTATTPTYCYECEGLLWGIARQGMRCSE
CGVKCHEKCQDLLNADCLQRAAEKSSKHGAEDRTQNIIMVLKDRMKIRERNKPEIFELIQ
EVFALDKSTHATHMKQIKQSVLDGTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG
KTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVWDEDDDIKSRVKQRFKRESDDFLG
QTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRMHISVEIKGEETVAPYHVQYTCLHEHL
FQYTTEEQNGGVVKIPDAKGDDAWKVYFEETAQEIVDEFAMRYGVESIYQAMTHFACLSS
KYMCPGVPAVMSTLLANINAYYAHTTQSSNNVSASDRFAASNFGKERFVKLLDQLHNSLR
IDLSMYRNNFPASSPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASQVVKDCVKACLN
STYEYIFNNCHDLYNREYQTDPSKAVPPDEQGPSIKNLDFWSKLITLIVSIIEEDKNSYT
PCLNQFPQELNVGKISAEVMWNMFAQDMKYAMEEHEKHRLCKSADYMNLHFKVKWLYNEY
CKELPTFQKHVPEYPAWFEPFVIMWLDENEEVSRDFLHGALERDKKDGFQVTSEHALFSC
SVVDVFSQLNQSFEIIRKLECPDPQIVGNYMKRFAKTIGNVLLSYADIIAKDFPNHVKKE
KVPCIIINNIQQLRVQLEKMFEAMGGKDLNVEASDFLKELQNKLNNVMDDLSRIFAVSFQ
PQIEDNVRQMGDILAQVKGQTVPANGSVVQEADNVLQPIMDFLDSNLSLFAKICEKTVLK
RVLKELWKLVMNTMEKTIVLPTLTDQTGTQMIFNAAKELGQLSKLKEHMGREEAKALTPK
QCAVIELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDKLIRKFVLSQN
AQVHGGKGIRYTANEDTPPEKPSGVDAVGEVVMGVDILPQPNGEHKISVKVVAANDLKWK
AQGFRPFVEVYIIGPHLSDKKRKFATKSKNNSWSPKFNESFQYSLGTEVGPESYELQVCV
KDYCFAREDRTVGMAVLQVKDIANKNSVTCWMPLGRRVHMDETGLTVLRILSQRNNDDVA
KEFVKLKSDQRSAEEGRS
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctgtgtgtgggagtgaagaaagccaagctggatggaccccaagagaaattc
aacacttatgtgactctaaaggtacaaaatgtgaagagcacaaccatcgctgtcaggggc
aacctgcccagctgggagcaagacttcatgtttgaaattaatcgtctggatctgggtctg
acagtagaggtgtggaacaaagggttaatctgggacaccatggttggcactgtgtggatt
cccctccacagcatccgacagtcaaatgaggaaggtccaggggagtggctcacgctggac
tctcaggtcatcatgtccgataatgagatctgtggcaccaaagatcccactctccacctg
gtgctgcttgacacacgcttcgaactgcctcttgatatcccagaggatgaggcacggtac
tgggccaaaaaactggagcagctcaatgccatgagggaccaagattattcataccaggag
gaacaagaacgcccactccgtgtaccaggcacccagtgctgtaactggagcctatggggg
gaccaacaaaatgaggatccagacagtgctgtggatgacagggacagcgactaccgcagt
gaaaccagtaacagcatcccccctccctactacagcacatcacagcccaatgcctctgtc
caccagtatcccatcagccaccagcaccgcaacatcagaagctactcttacccacggtcg
ggcaacggccacgaccttgactaccaccatcagaggaccgtcagtcccacagggagctat
gcatcgtccgcagagctgagtcggtgcagcagtcagctgagtgaggaggactacggcggc
gagtacggagagagggacccctacgacgagaacgattcgtaccactcctgccactcctct
gttagctacagcaaaggttccccagattgggaccctgacgagacccagggggcgtacagc
gatgagggtggctacagcaaagatggaggagaggaggtggctctgtacgaggaggatgac
gggggactgtatgagggagaagaggatggcctctatgaggatgaggagatgatgtatgat
gatgaggatttatataatttggatgggaccctcagtgaggacatggagcctccattcact
cccacgccaacgtcgactgcccctccaactctcgatgtacccagctccagacctcctcta
gagaaacagccttccttacaccaacaacaacaacagccctctactcaaccctccaaccaa
acatccaaccaggctcaccctcctggcatggccccagcagcacagcccccctctggtcaa
ccaacagcccaaccacccaaacagccccagccccaaacacagcctcagccgcagccagcc
ccgtctgccacttccttcttctcaatggccaaacccttaacagctgcagtcacaggcttg
gcctctactttcctgtcttcggttcccaccgcccagcctgcccagtctcaccctccagcc
tcagccgtatctcaacagcaccagtccactgcagctaactcagtccctccatctcaccca
gccaccatggctaactcagcctctcagcccccctccagtgccatgggcccatcctcccaa
cagatcccctcctctgcacagccccaatcccaagtcagtgatcctgccaccacacagtca
gctgcccctgaggaccaggctcctcagctggaagaggaaccatggctagaagaggacatg
atgttggagaaggaagccaggacacccccggcccaggcagaggagaagctctccgtggag
gagaaggaggagaaatttgaagagagcagaccgccaacgccagtagagttagaagagatg
ccgcctgagagtcctccagttatagaggagcccaaagagccggtcgacccagcagtcaga
gccaaagagaactggctgaggctttacaacaaggtcctagagcagcttcgggaggctcgg
ggagagacgtccagctcactgtggtttggtaaaggaggaatgggaggtgcactttacagt
attgacagcatgcctgaccttcgcaagaggaaggccattcctctggtcagagatctggct
atgtctctagtccagaactctcgtaaagctggaatcacttcagccatggcttccaccact
cttggcaatgaagagctgaagagccatgtttataaaaagactctgcaggctctgatctac
cccatctcctccaccactccacacaactttgaggtgtggacggccaccactcccacctac
tgctacgaatgtgaggggctgctgtggggtatcgcccgccaaggcatgcgctgctctgag
tgcggcgtcaaatgccacgaaaagtgccaggacctgctcaatgccgactgtctgcagaga
gctgcagagaagagctccaagcacggggcggaggatcgaacccagaacatcatcatggtc
ctgaaggaccgcatgaagatcagagagcggaacaaaccggagatctttgagctgatacag
gaggtctttgccctcgacaagtcgacacacgccacgcacatgaaacagatcaagcagagc
gtgcttgacgggacctcaaaatggtcagcaaagatcagcatcactgtggtgtgtgctcag
ggcctgcaagctaaagacaaaacaggctccagtgacccatatgtcactgttcaagttggg
aagaccaagaagaggaccaagaccatctacggcaacctcaaccctgtctgggaggaaaac
ttccactttgaatgccacaactcgtccgaccgcatcaaggtccgcgtgtgggacgaggac
gatgacatcaagtctcgtgtgaagcagaggttcaaacgcgagagcgacgacttcctgggt
caaacaatcatcgaagtccgcactctgagcggggagatggacgtttggtacaacctggac
aagagaacagataagtctgctgtgtcaggagccatccggatgcacataagtgtggagatc
aaaggagaggagacggtagctccttaccatgtccagtacacctgtctacacgagcatctg
ttccagtacaccaccgaggagcagaatggtggtgtagtaaagatcccagatgccaaaggg
gatgacgcttggaaggtgtattttgaggagacggctcaggagatagtggatgagttcgcc
atgagatatggagtcgagtccatctaccaggccatgacccactttgcctgcttgtcatct
aagtacatgtgcccaggagtgccagccgtgatgagcaccctgctggccaacatcaatgct
tactacgcccacaccacccagtcctccaacaatgtctctgcctcagacagatttgctgca
tcaaactttggcaaggagaggtttgtcaaactgctggatcagctgcacaactccctgagg
attgacctgtccatgtaccggaataacttccctgccagcagtcctgaaagactacaagat
ctcaagtctactgtcgatctcttgacaagcatcacattcttcaggatgaaggtccaggag
ctgcagagtccccccagggcaagccaggtggtgaaggactgtgtgaaagcctgtctcaac
tccacctacgagtatattttcaacaactgccacgacctctacaacagggaatatcagaca
gacccctcaaaggcagtccctccagatgagcagggtcccagcatcaagaacctggacttc
tggtccaaactcatcaccctcatcgtctccatcatagaggaggacaaaaactcctacact
ccctgccttaatcagtttccccaggaactgaacgtgggcaagatcagcgctgaggtcatg
tggaatatgtttgcacaagatatgaaatatgccatggaggagcatgagaagcaccgtctg
tgtaaaagcgcagattatatgaacttgcacttcaaggtgaagtggctctataatgaatac
tgcaaggagctgcccactttccagaagcacgtacctgaatatccagcctggtttgagcca
tttgtcatcatgtggttggatgaaaatgaggaagtgtccagagattttctccatggagcc
ctggagagggacaaaaaagacgggttccaggtcacatcagagcacgctttgttctcctgc
tcagtggtggacgtgttctctcagctcaatcagagctttgaaatcatccgcaagctggag
tgtccagaccctcagatcgtcggcaactacatgaagagatttgccaagaccatcggcaat
gtcctgttgtcttatgctgacatcatagcaaaagactttccaaatcatgtcaagaaggag
aaagtgccatgtatcatcatcaataacatccagcagctcagagttcagttggagaagatg
tttgaggccatgggaggcaaagacctcaacgtggaggctagtgacttcctgaaggagctg
cagaacaaactcaacaacgtgatggacgacctcagccgcatctttgcagtcagtttccag
ccccagatcgaggacaacgtgaggcagatgggggacatcctagctcaagtcaaaggtcag
accgtgccagccaatggcagcgtggttcaggaggcggacaatgtcctgcaacccatcatg
gacttcttggacagcaacctgtcactgtttgctaagatctgtgagaagaccgtcctgaag
cgagtgctgaaggagctgtggaaactggttatgaacacaatggaaaagacaattgttctt
ccaacacttacagaccagacgggcacccagatgatcttcaatgctgctaaggagttgggc
cagctttccaagctaaaggagcacatggggagagaggaggccaaagctctgactcctaaa
cagtgtgcagtgatagagctggcactggacactattaagcaatacttccatgctggcggc
gtgggcctgaagaaaacattcttggaaaagagtccggacctgcagtctctgcgctacgcc
ctgtctctgtacacacaggccacagacaaactcatcaggaagtttgtcctctcacagaat
gctcaggtccatggggggaaagggatcaggtacacagcgaacgaagacacaccgccggag
aaaccatctggagtggatgcagttggtgaggtcgtcatgggcgtggatatcttaccccag
cctaatggagaacacaagatcagcgtcaaagtggtggctgctaatgacctcaagtggaag
gcgcagggcttcaggcccttcgtggaggtctacatcatcggccctcacctcagcgacaag
aagaggaagtttgccacaaagtccaagaacaacagctggtcgcccaagttcaacgagagc
ttccagtactccctgggcaccgaggtgggtccggagagctacgagctgcaggtgtgcgtg
aaggactactgcttcgccagggaggaccgcaccgtgggcatggccgtgctgcaggtgaag
gacatcgccaacaagaacagcgtcacctgctggatgccgctgggcagacgcgtccacatg
gacgagacgggcctgaccgtgctgcgcatcctctcccagcgcaacaacgacgacgtggcc
aaagagttcgtgaagctgaagtcagaccagcgctcggccgaggagggccgcagctga
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