Lates calcarifer (barramundi perch): 108883619
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Entry
108883619 CDS
T04895
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108883619
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108883619
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108883619
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108883619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_2
ig
fn3_2
DSPc
Tissue_fac
Y_phosphatase3
PTPlike_phytase
V-set
Motif
Other DBs
NCBI-GeneID:
108883619
NCBI-ProteinID:
XP_018532486
LinkDB
All DBs
Position
LG4:complement(15276585..15343093)
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AA seq
1963 aa
AA seq
DB search
MPLPRTGGVQAQSRRPILGLCLSPSHLCMLLPLIILLTSPLSSVCGALAPPKFTKIPTDQ
IGVSGGVASFVCQATGNPKPTVYWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDE
NIYECVARNSEGEVSVTAKLAIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIP
DPEISWFKDFLPVDPTTSQGRIKQLRSGALQIENSEETDQGKYECVATNSQGVRYSSPAN
LYVRGATDTLRRVPPRFSILPSNHEIMPGGSVNITCVAVGSPMPYVKWMLGSEDLTPEDE
MPIGRNVLELNSVRESANYTCVAMSSLGIIEATAQVLVKTLPKPPGTPIVTETTATSVTI
TWDSGNPDPVSYYIIQYRAKGPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAFNSIGQ
GPPSTRVEARTGEQAPASPPRNVQAHIISQNTVMVRWEEPEEPNGQVKGYRVYYTMDPSR
PMNEWQIHNVQDSVITTIQNLVTSETYTIQVLAFTSVGDGPFSDPVHVKVMPGVPGQPGK
FKVGKVTDTSIELTWEPAYTKEGIVNYELLYKPVKFGSLEKLTFGPRNSYTVEGLKANTE
YSFSLAAISNKGIGAFTNELVQRTSQAKPSAAPEGVSCESASSTSLRVSWRPPPMEGQNG
ELAGYELRYQRVSGAGGGGQGQEVKGLPIPAQKGQTVVEGLEKWSWYNITMAASTTEGTG
PSSPAVLCRTDEDVPGAAPRQVDVQPLNSSALRVTWRSVLPRLRQGQIRGYQVHFNPAES
SESRNLPRIKDLLLDESQMEEDDSTQYELILGGLKAETMYSVSVAAYTTKGDGAHSKAKL
VQTPGIVPGPPSLWVRPGSGPSVVVRWAAPLECSESGSDSRGAPVEIQGYRLQFGLKNTT
LDTIVDFTNREKNFTVRDLSPGSSYVFVLSAKSRAGYGDVVQQEITVPMFPPLGYPKISD
FVNATCCSLQFSWLPLAPEESNGVITEYTIAYKEAAGLKPSADPGPSASPALPAPPWLIT
LPASDSSYTILGLNHSTAYELQLRAHNKAGPGPFSPPLVCQTLAFETDVPRNFSVNLATK
TSVLLTWEFPESSNPYRFTVEYNRQKMEVDARLRKAVIPNLQPDTSYDFKITAPEGNMGG
LRHRITAKTSPPITIRRPEIDHTRETETTVTIILPSLETRTPIKNVYVVVVPLRRARGVI
RHLKSPDEMDLEELLKDISQRQRDSRQQKQVDLRRAYITARFTPATLPAFFTLGDQLDYG
GFENRALEPGQEYVFFILAELNSTTGKMYVASPYTDPVIAPDSDPQPLDAGDGLIWVVGP
VLAVVFIICIVIAILLYKNKPDSKRKDSEPGTKSLLSNAEMMAHHPTDPVEMRRINFQTP
GMMSHPPIPISELAEHIELLKANDNLRLSQEYESIDPSQQFTWEHSNLEVNKPKNRYANV
IAYDHTRVILAPIEGILGSDYINANYIDGYRKQNAYIATQGPLAETFGDFWRMVWEQRAA
SVVMMTRLEEKSRIKCDQYWPSRGTETYGMIQVSLLDTMELATFCVRTFSLHKSGSSERR
EVRQFQFTAWPDHGVPEYPTPFLNFLRRVKACNPPDAGPIIAHCSAGVGRTGCFIVIDAM
LERIRHERTVDIYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVACGNTEVAARSLYSYM
QKLSKVESGEHVTGMELEFKRLANTKAHTSRFVTANLPCNKFKNRLVNIMPYETTRVCLQ
PIRGLEGSDYINASYIDGYRQQKGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREM
GREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWP
EQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGA
VDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAT
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcccaggacaggtggagttcaagcccagtccaggaggcctatcctggggctc
tgccttagcccctctcacctgtgtatgctgctgccgttgattatcctgctaaccagccct
ttgagcagcgtgtgtggagcactagctccccccaagttcaccaagattcccacagaccag
atcggagtgtcagggggcgtggcatcatttgtgtgccaggctactggcaatcccaagcct
accgtctactggaacaagaagggcaagaaggtcaactcccagcgtatcgagaccatagag
tttgatgagggtgcaggcgctgtgctgaggatccaaccgctcagagcaccccgagatgag
aacatctacgagtgtgtggcacgcaacagtgaaggagaggtgtctgtcactgcaaagctg
gccattatcagagaggacctgttgccatttggcttccctagtatagacatgggtccccag
ctgaaggtggtggagcggacgaggacggccaccatgctgtgcgccgccagtggcatcccc
gacccagagatctcctggttcaaagacttcctgcctgtcgaccccaccaccagccagggt
cgcatcaaacagctccgatcaggagcgttacagatcgagaacagcgaggaaaccgaccaa
gggaagtacgagtgcgtggccaccaactctcaaggcgtgcgctactcctcccccgcaaac
ctatatgtgcgaggagcgacagacacattgcgccgcgtgccccctcgtttctccatcctc
ccctccaaccacgagatcatgcccggagggagcgtcaacatcacctgcgtggccgtgggt
tcgcccatgccctacgtcaagtggatgctgggcagcgaggacctgacccccgaggacgaa
atgccgatcggccggaacgtgctggagctcaacagcgtgcgtgagtctgcgaactacacc
tgcgtggccatgagcagcctgggcatcatcgaggccaccgctcaggtcttagtcaagact
ttgccaaagcctcccggtacacccatcgtcacggagaccactgccactagcgtgaccatc
acctgggattctggcaaccccgacccagtctcctactacatcatccagtaccgagccaaa
gggccggacagcaagtatgagacggtggacagcatcaccaccacccgctacagcatcggg
ggactgtatcccaacaccgagtatgaaatcagagtgtcagccttcaacagcatcggccag
gggcccccctccacgcgtgtggaggctcggacgggagagcaggccccggccagccctccc
cgaaatgtccaggctcacattatctctcagaacactgtgatggtccgctgggaggagccg
gaggaacccaacggacaggtgaaaggctaccgtgtgtactacaccatggacccctctcgg
cctatgaatgagtggcagattcataacgtccaggacagtgtgatcaccaccatccagaac
cttgtgacctcagaaacatacactatccaagtcttagccttcacctccgtaggggacgga
cccttttcagaccccgtccatgttaaagtcatgcctggagtcccaggccagccagggaag
tttaaagttggaaaggtgacagacaccagcatagagctgacctgggaacccgcttacacc
aaggagggaattgtcaactatgagctgctctacaaacctgtcaagtttggcagtttggag
aagctgaccttcgggccaaggaattcttacaccgtggagggcctgaaagcgaacacagag
tactccttctccctggccgccatctcaaacaaaggcatcggcgctttcactaatgaactg
gtccagaggacgtcacaagccaagccctcagctgcacccgagggtgtgtcctgcgagagt
gccagctccacctcgctgagagtaagttggaggccgcctccaatggagggccagaatggc
gagttggcaggttatgagctcagataccagagagtttctggggcaggaggcgggggtcag
ggccaggaggtgaaggggcttcctatcccggcccagaagggtcagacagtggtagagggg
ctggagaaatggagctggtacaacatcaccatggcagcctccactacagaagggactgga
cccagcagcccggctgtgctttgcagaactgatgaggatgtccccggcgcagcccctcgt
caggtggatgtccagccgctcaactcctcggcacttcgagtgacctggcggtcagtgttg
ccacggctacggcaaggccagatccgtggctaccaggtgcatttcaaccccgcggagagc
agtgaatctcgcaaccttcctcgcattaaagacctcttattggacgagtctcagatggag
gaggatgactcgactcaatatgagctgattttgggaggtctgaaagcagagactatgtac
tctgtctcagtggcagcatacaccaccaaaggggatggagcacacagcaaagccaaactg
gtgcagaccccagggattgtgcccggccccccctccctttgggtgcgtccgggatcgggt
ccatcagtggtggtgcggtgggctgctcctctagagtgctctgagtcaggctctgatagc
cgtggggcaccagtggaaatccagggctaccgcctacagtttggcctgaagaataccact
ttagacaccattgtggatttcacgaatcgggagaaaaacttcactgtcagagacctctcc
ccgggctcctcctacgtctttgtcctctccgcaaagagccgagcaggctatggtgatgta
gtgcagcaagaaataacagttcccatgttcccacccttgggataccccaaaatatctgac
tttgtcaatgccacttgctgctccctccagttctcctggctgcctcttgccccagaggag
tccaatggtgtcattacagagtacaccatagcttacaaagaggctgcaggcctcaaaccc
tctgctgaccctggcccctcagcctcaccagccctccctgctcccccgtggctgatcacg
ctaccagcgagtgattccagctacaccatcctgggcctcaatcacagcacagcctacgag
ttgcagctcagagcccacaacaaggcagggccgggccccttcagcccacctctggtgtgc
cagaccctggcctttgaaacagatgtgccaaggaatttttcagtcaatctggccactaag
accagtgttctcctgacctgggagtttccagaaagcagcaatccctatcgcttcacagtg
gagtataatcgccagaagatggaggtggatgctcgtttgagaaaggcagtcatcccaaac
cttcagcccgacaccagctacgacttcaagatcactgctcccgagggcaacatgggaggc
cttcgccaccgcatcaccgccaagacctccccaccaatcaccatccgccgccctgagatt
gaccacacccgtgaaactgagaccactgtcaccataatcctgccatcgctggagactcgc
actcctatcaagaatgtttatgttgttgtggttccactgaggagagcccgcggcgtcatc
agacacctcaagagcccagatgaaatggacctagaggagctgttaaaagacatcagtcaa
agacagagggattctcggcagcagaagcaggtggacttgcgccgggcttacatcacagcc
cgtttcacacctgccaccctaccggccttcttcaccctgggggaccagctggactacgga
ggctttgagaaccgagctctagagccggggcaggagtatgtcttcttcatcctagctgag
ctcaactccactaccgggaaaatgtacgtggccagcccctacacagatccagtaattgct
ccagattcagaccctcagcccctcgacgcaggcgacggtctgatctgggtggtgggaccg
gtcctggccgtggtcttcatcatctgcatcgtcattgccatcctcctttacaaaaacaaa
cctgacagcaagcgcaaggactctgaacccggaaccaagagccttttgagtaacgcagag
atgatggcccatcacccaacagaccctgtggagatgagacgcatcaacttccagactccc
ggaatgatgagccatcctcccatccctatcagcgagctggctgagcacatagagctgctg
aaagccaacgacaacctgaggctctcgcaggagtacgagtccatcgaccccagtcagcag
ttcacctgggaacattcgaacctggaggtcaacaagcccaaaaaccgctacgctaacgtc
atcgcgtacgaccacaccagagtcatcttggctcccatagaaggtatcctggggagtgac
tatatcaacgccaactacattgatggctacaggaagcagaatgcctacattgctacccag
gggcccctagcggagacgtttggggacttctggaggatggtatgggagcagcgggccgcc
tctgtcgtcatgatgacacgcctggaggagaagtcacggataaagtgtgatcagtactgg
ccgagccgtggaacagagacatacggtatgatccaggtctccctgctggacacaatggaa
ctggccactttctgcgttcgcaccttttccctgcataagagtggcagcagcgagcggaga
gaggttcgtcagttccagtttacagcttggccagatcacggcgtgccagagtatcccacc
cccttcctcaacttcctccgcagggtgaaagcctgcaaccctcctgatgccggacccatc
atcgctcactgcagtgccggagtcggtcgcaccggctgcttcattgtcatcgacgccatg
ctggagcgtattcgacacgagcgcaccgtggacatctatggtcacgtgaccctgatgcgc
tcacagaggaactacatggtgcagacggaggaccagtacagctttatccacgaggccctg
ctggaggctgtggcctgcgggaacaccgaggtggccgccaggagtctgtactcctacatg
cagaagctgtccaaggtggagagtggagagcacgtcaccggcatggagctggagtttaag
cgactggctaacaccaaagcccacacgtcccggtttgtcacagccaacctgccttgcaac
aaattcaagaaccgactggtcaacatcatgccctacgaaaccacccgcgtctgcctccag
ccaatcagaggcctggagggctccgactacatcaacgccagctacatagacggatacagg
cagcagaaaggctacatcgccacccagggtccactggctgagactacggaggacttctgg
aggatgctgtgggagcacaactccaccatagtggtcatgctcactaaactgagagaaatg
gggcgggagaagtgtcaccagtactggcccgcagagcgctcagccaggtaccagtacttc
gtggtggatcccatggcagagtacaacatgccacagtacatcctgcgggagttcaaagtt
acggatgccagggacggccaatcgcggacagtgcgtcagttccagttcaccgactggcca
gagcaaggtgtgcccaaatctggagagggcttcattgatttcattggccaagttcacaaa
accaaggagcagtttggtcaggatggaccaatcagcgttcactgcagtgctggcgtgggg
cggacaggtgtcttcatcactctgagtattgtcctggagaggatgcgttacgaaggggcg
gtggacatcttccagactgtcaaaatgctgcggacacagagaccagccatggtgcagact
gaggacgagtaccagttctgctaccaggctgctctggagtacctgggtagctttgaccac
tatgcaacgtaa
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