Lates calcarifer (barramundi perch): 108883620
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Entry
108883620 CDS
T04895
Symbol
fem1a
Name
(RefSeq) protein fem-1 homolog A
KO
K25805
protein fem-1 homolog A/C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108883620 (fem1a)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108883620 (fem1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
108883620
NCBI-ProteinID:
XP_018532489
UniProt:
A0A4W6ERF7
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Position
LG4:complement(15346120..15349856)
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AA seq
617 aa
AA seq
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MDITTAVFNAARDGKLKLIQKLLSNKTPEELEALAEEKTQGGTPLLIASRYGHLEVVDYL
LEHCKANVELGGSVNFDGETIEGAPPLWAASAAGHLPVVKTLLKHGASVNNATLTNSTPL
RAACFDGHLEIVRYLVEHRADMEVANRHGHTCLMISCYKGHKEIAKFLLDRGADVNRKSV
KGNTALHDCAESGSLDIMKMLLKCNARMERDGYGMTPLLAASVTGHTNIVEYLAHQPRTS
REERIDALELLGATFVDKKRDLLGAMRYWRRAMELRQPGDKAGSLAKPPPGPPIPAYGCA
QEVSTAEELEALITDPDEMRMQALLVRERILGPSHPDTSYYIRYRGAVYADSGNFERCIS
LWKYALDMQQSNLDPLSPMTASSFLSFAELFSFVLQDRAKGTLSTRITFHDLMTVLGKSV
REVERAVAQRENPPEAPQFTKALSIILHLIFLLEKLECSPEQEHQKKHTVYRLLKLNPRG
RSSFTPLHMAVDKETTSVGRYPVGRFPSQAVAALLLECGADVDSRDCENNTPLHIAASNG
CPEIMALLMKAGAHFDATNAQRKTAYELLDEQSSGHPALYPLNYITLQCLAARAIEKHRL
PYRGLISEEMEAFIELH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacataacgacggcggttttcaacgcggccagagatggtaagctaaaacttatccag
aagttgctgagcaacaaaactcctgaggagcttgaggctttagccgaggagaaaacacag
ggaggcacccccctgttgatagcctctcgatatggacatttagaggtagtagattacctc
cttgaacactgtaaagcaaatgttgaactcgggggttcggttaattttgacggcgagacc
atcgagggtgctccgccgctgtgggcggcttcggcagccggtcacctccctgtggttaag
acgctactgaaacacggtgcctcagtgaacaatgcaacactaactaactcaacgccgctc
cgagccgcctgtttcgacggtcacctggagatcgtccgctacctggtggagcacagagcc
gacatggaggtcgccaaccgccacggccacacctgcctcatgatctcctgctataagggc
cacaaggagatagcaaagttcctcctggaccgcggagcagatgtcaaccgcaagagcgtg
aaaggaaacaccgccctccacgactgcgccgagtcaggtagtctggacatcatgaagatg
ctacttaagtgcaatgcccgcatggagagagacggttacggaatgaccccactcctcgct
gcgagtgtaacaggtcacaccaacattgtggagtatctcgcccaccagcctcgcacctcc
agagaggagcgcatcgatgcgcttgaactccttggggccacttttgtggacaaaaagcgg
gatctcttgggggcaatgaggtactggaggagggctatggagctgaggcagccaggggac
aaagctggatccctggccaagcctccacccggtcccccaatccctgcttacggctgtgcg
caggaggtgagcacggcggaggaactggaagctttgatcacagacccagatgaaatgagg
atgcaggctctgttggttcgagagcgcatcctggggccatcccacccagacacctcttat
tacatccgctacagaggagctgtgtatgctgactcaggcaactttgagcgctgcatcagc
ctgtggaagtatgctttagacatgcagcagagcaacctggacccgctcagtcccatgaca
gcctccagtttcctgtcctttgcagagctcttctcttttgttctacaagaccgggccaaa
ggtaccctgtcaacacgcatcaccttccatgatctgatgaccgtgctggggaaaagcgtg
agggaggtggagagagctgtggcacagagggaaaaccccccagaagctcctcagttcacc
aaggccctctccatcatcctccacctcatctttctgttggagaagctggagtgcagccct
gagcaggagcaccagaagaagcacacggtgtaccgtctgctgaagctgaaccctcggggt
cggagcagcttcactcctctccacatggctgtagacaaagaaaccacgtccgtgggccgc
tacccggttggccgcttcccctcccaggcggtggcagcactgctcctcgagtgtggagca
gatgtcgattcacgtgactgtgagaacaacacgccgctgcacattgctgctagcaatggt
tgcccagagattatggcactacttatgaaggctggggctcactttgatgccacaaatgca
cagaggaagacagcctacgagctgttggatgagcagagcagcgggcacccggccctttac
ccgctgaactacatcacacttcagtgcctggcggcgcgtgcgattgaaaagcacagactg
ccctacaggggcctcatctctgaggagatggaggctttcattgagctgcactga
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