KEGG   Lates calcarifer (barramundi perch): 108883687
Entry
108883687         CDS       T04895                                 
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108883687
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     108883687
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     108883687
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108883687
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN zf-HC5HC2H PHD_2 PHD Tudor_5 Rad9_Rad53_bind DUF7141 53-BP1_Tudor DUF4537
Other DBs
NCBI-GeneID: 108883687
NCBI-ProteinID: XP_018532619
UniProt: A0AAJ7LUP2
LinkDB
Position
LG4:16590444..16608852
AA seq 1204 aa
MASDVVSQNHGSKGIMTFHPTAEEFKNFSRYIAYIESQGAHKAGLAKIVPPKEWKPRGSY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKSMTVREFRRIANSDKFCSPHYDDFEELER
KYWKNVTFNPPIYGADVNGTLYDPEVKEWNICHLDTILDTVERESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLR
HKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYAYHAGFNHGFNCAESTNFATERWIEY
GKQAVLCSCRKDMVKISMDVFVKKFQPERYEQWLAGRDVVPIDHSRPTPEAREFLGDSFN
DVTSNSNSSSVESCGEDGERKSTTQRIETKRHRVCLEVPEEVVPKDEDDEDEEQYGKRPR
LSLIPPRPMSQDGKRNKGPPKLVVTPTKLTLMDPFHRGLTQSDGGRPPHYTKTRAPAISS
QARNGHLSVSVAPTWTEATAQPARKMGVASLLFHRTLSPKDTLQVHSYTLEKQRHPHTQL
QVHSYAREHQPRHLQHKTCTPSHTQVQASSQAPSCERTEPQPESKIILTKVALNESEAQG
PVEQDQEEDKPKMSTSIETQAEVENPEVEPTSKFASFQTEPQPKDLSKAEIEAPKSNKRK
SNQCPLADSGITILKDTIPVKKPNHDEMKVIAHNHHQVSEEQSYCKSVVKKQQEQQQQQQ
QQQQQQQQEQEQQQQEQLRKLPRHHPLIREMHSDDDVYVDVEVEQEEKEEWAKPLTQLWQ
CRPYNPHAEREYNKSMGQKAPYCSICLIFHTYHQSESSSTSSSMTLVNRPGGRQWSKPLI
PEMCFNTQTSRANDSGEGQLSNPNVAEDGTSRLVSCAQCCVRVHTSCYGVSGDGAELDDW
LCARCEADAITEDCCLCSLRGGALQRANNDKWVHVLCAITVLEARFVNITERSPIDLSAI
PLPRFRLKCVYCRKRMKREVTGCCVQCSHGRCSTAFHPTCAQAAGILMHPDDWPFVVFVT
CHRHRTPVIPERNKASMRELAVGQRVICKYKNGRYYHSEVVELTTATFYEVVFDDGSYSD
NLFPEDIENRDCVRLGPPAEGDAVQVRWTDGLIYGAKFVASHSIPMYLVEFEDGSQITVK
REDIYTLDEDLPKRVKSRMSVASDMRFELFTQNDVKQNSKRQRVINSRYREDYIEPVIYR
AIME
NT seq 3615 nt   +upstreamnt  +downstreamnt
atggcgtcagacgtggtctcccaaaaccatggttccaaggggatcatgacttttcacccc
actgctgaggaattcaagaacttcagccgctacattgcatacatagaatcccagggagca
cataaagcaggcctggctaaaattgtcccaccaaaggagtggaaacccagaggatcctat
gatgatatagatgacttagtgatacccgcccccatccaacaggtggtgacaggccagtcg
ggccttttcactcagtacaacattcagaagaagtccatgactgtcagagagttccgcagg
attgccaacagtgacaagttctgtagtccacattatgatgactttgaggagctggaaagg
aagtactggaagaatgtcacatttaaccctcctatatatggagcagatgttaatggaacc
ctgtatgaccctgaagtcaaagagtggaacatttgtcatctggacaccattttggatact
gttgaacgtgaaagcggcatcaccattgagggtgtaaatacaccctacttgtattttggc
atgtggaagaccacctttgcatggcacactgaggacatggacctctacagtatcaactac
ttgcactttggagaacccaaatcatggtactgtgttcctccagagcatgggaaaagattg
gaacgtctggctaaagggttctttcctggtagttcccaaaattgtgaggcttttttgagg
cacaagatgactctcatctctccctccatcctgaagaagtatggcattccgtttgaaaag
attactcaggaggctggtgagttcatggttactttcccctacgcctatcatgccggcttc
aaccacggcttcaactgtgctgagtccaccaacttcgccacagagagatggattgaatac
ggcaagcaagcagttttgtgctcatgccgtaaggacatggtgaagatttccatggatgta
tttgtgaagaaattccagccggagcgttatgaacagtggttggcagggagagatgtggta
cccatcgaccactcacggcccaccccagaggctagagagttcctgggggactctttcaat
gatgtcaccagcaacagtaacagtagctctgtggagagctgtggggaggatggagagcgg
aagagtactacacagaggatagagaccaagagacacagggtgtgcctggaggtgcctgag
gaggttgttcccaaggatgaagacgatgaagatgaggagcagtatgggaagcgtcccagg
ctaagccttatacctccacgtcctatgtcacaagatggcaagagaaataaaggcccacca
aaattggttgtcacgccaaccaagctcactctaatggatccgtttcacagaggcttgacc
cagagtgatggaggccgtccccctcattataccaagactcgtgcacctgccatctcgtcc
caggccagaaatggacatctctcagtttccgtggcacctacatggacagaggccacagct
cagcctgcccggaaaatgggggtagccagcctgctcttccacaggactctaagtcccaaa
gacactctccaggtgcacagctacactctagaaaagcagcggcatcctcacacgcagctc
caggtgcacagttacgccagagagcatcaaccccgtcatcttcagcacaaaacctgtaca
ccgtcacacacacaggttcaggcttcatctcaggcaccaagctgtgaaagaacagagcca
cagcccgaatctaaaatcattctcaccaaagtagcactgaatgagtcagaagcacagggt
cctgttgagcaggaccaagaggaggacaaacccaaaatgtcgacgtccattgagactcag
gctgaagtggagaatcctgaagtcgagcccaccagcaagtttgcttccttccagactgaa
ccacaacctaaagacttgagcaaagcggagatagaagctcccaagagcaacaagcgaaag
agtaaccaatgcccccttgcggatagtggcattaccatcctgaaagacaccattcctgtc
aagaaaccaaatcatgatgagatgaaggtgatcgctcacaatcatcaccaggtatcagag
gagcagtcatactgcaagtcagtggtgaagaagcagcaggagcagcagcagcagcagcag
cagcagcagcagcagcagcagcaggagcaggagcagcagcagcaggagcagctccgtaag
ctgcctcgacaccaccctctaatcagagagatgcacagtgatgatgatgtgtacgtagat
gtggaggttgaacaagaggagaaagaggagtgggcaaagccactaacccagctgtggcag
tgtcggccatataaccctcacgcagagagggagtacaacaagagtatgggccagaaagcc
ccttactgctccatctgtctgatcttccacacctaccatcagtccgagtccagcagcaca
agttccagtatgacgttggtgaaccgtccaggaggccgccagtggtccaaaccactcatc
ccagaaatgtgtttcaacacccaaaccagcagggcgaatgatagcggagagggacagctg
tctaaccctaatgtagcagaggacgggaccagccgactagtcagctgtgctcagtgctgc
gtccgtgtacacaccagttgttatggcgtgtctggtgacggagcggagcttgatgactgg
ctgtgtgctcgctgcgaggctgatgccatcaccgaggactgctgtctgtgttccctgaga
ggtggagccctgcagagagccaacaatgacaagtgggttcatgtgctgtgtgccatcact
gtgctggaagctcgctttgtcaacatcactgagcggagccccattgacctctctgccata
ccgctgccacggttcagactgaagtgcgtgtactgcaggaagcggatgaagcgggaagtg
acgggctgctgcgtccagtgctcccatgggcgttgctccacggcgtttcaccccacctgc
gctcaggcagctggtatcctcatgcacccagatgactggcccttcgtagtcttcgtcacc
tgccacagacacagaacgcctgtcatacctgagcgcaacaaggcgtccatgcgggagttg
gcagtggggcagagggtgatctgtaaatacaaaaatggccgctactaccacagtgaggtg
gtggaactgaccacagccaccttctatgaggtggtgttcgatgacgggtcctacagcgac
aacctcttccctgaggacatcgagaaccgtgactgcgtccgccttggtccacccgccgaa
ggtgatgctgttcaagtgcggtggacagatgggttgatatatggagccaaatttgtagca
tcacactccatccccatgtacctggtggagtttgaggatggatcgcaaatcactgtcaag
cgggaagacatctacactctagatgaggatctgcccaaacgagtcaaatcacgaatgtct
gtggcgtcagacatgcgtttcgagctcttcacacagaacgacgtcaaacagaactccaaa
aggcaacgagtcatcaactcccgatacagagaggactatatcgagcccgtcatttaccga
gccatcatggagtga

DBGET integrated database retrieval system