Lates calcarifer (barramundi perch): 108883719
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Entry
108883719 CDS
T04895
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D isoform X1
KO
K22038
volume-regulated anion channel
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108883719 (lrrc8da)
Ion channels [BR:
lcf04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
108883719 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_4
LRR_8
LRR_14
LRR_1
LRR_9
LRR_R13L1-DRL21
LRR_LRWD1
CO_dh
SHP
Motif
Other DBs
NCBI-GeneID:
108883719
NCBI-ProteinID:
XP_018532687
UniProt:
A0A4W6FFI1
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Position
LG4:complement(17005801..17012007)
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AA seq
852 aa
AA seq
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MMFTLTEVASLNDIQPTYRILKPWWDVFMDYLGLVMLMLAIFAMTMQITKDQVACLPCLE
DPEEASGPKPHSFPQPSASDPASSPATGAPVATTIPLVTKDLPDEAVHEIHVTQQHTAVF
AEKYANQPQPTGVRTNLDYQQYIFINQICYHNALPWYSKYFPYLTLIHTIVLMVSSNFWF
KYPKTSSKIEHFVSILGRCFESPWTTKALSETACEDSEENKQRMTGTSSVPKQVSLEGKD
ETVTSSTPMLGVKFSADKPIAEVPSSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYK
LYVAQTIVKTVKFILILSYTSTFMAEINFKHSCKPDIKQLTGYREFFCTHNMAFMLNKLL
ISYMALILIYGMACLYSLFWVFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQY
DQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVTRNAQDQQELHLFMLSGLPNAV
FDLTDLEVLKLELIPEVRFSAKVSQMTSLQELHLCHCPAKVEQTGFAFLRDHLRCLHVKF
TDVAEIPAWVYLLRSLRELNLIGNLSSENNKMIGLESMRDLRHLKTLCLKSNLTKMPTNI
TELSPHLIKLVVHNDGTKLLVLNSLKKMTSLIELELYSCELERIPHAIFSLTNLQELDLK
SNNIRTIEEIISFQHLKRLTCLKLWHNKIITIPSSIGQVKSLESLHLSHNKLESLPPALF
TLPKLRHLDVAHNSIMVLPPDVGLLHNLQHLAINSNKLEVLPKPLFRCTKLRVLCLGHNA
LTVLPEAVGQLVQLTQLELRGNCLDRLPALLGNCRMLRKNGLIVEDHLFDTLPVDVKESI
SRETNVSFTSGL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacactcaccgaggtcgcatccttgaacgacatccagccgacgtaccgcatc
ctaaagccatggtgggatgtcttcatggactacctgggcctggtcatgctcatgctggcc
atattcgccatgaccatgcagatcaccaaggaccaggtggcctgccttccttgtttggag
gacccagaggaggcctcaggacccaaaccccactcgttcccccagccgagtgcaagcgac
ccagcctcatctccagccaccggggcccctgtggcaaccaccatcccattagtcaccaag
gacttaccggacgaagccgtccacgagatccacgttacacagcaacacactgctgtgttt
gcggagaaatatgccaatcaacctcaaccaacgggggtcaggaccaatctagactatcaa
caatatatctttattaaccaaatatgttaccacaatgccttgccctggtactccaagtac
tttccatacctcactctcatccacacaattgttctcatggtcagtagcaacttctggttc
aaatacccgaaaacaagctcaaagattgaacattttgtttctattctgggaagatgtttt
gagtctccatggactacgaaggctttgtccgaaacagcttgtgaggactcagaggagaac
aaacagaggatgaccggcacctcttcggtaccaaagcaggtatctttagaggggaaggac
gaaactgtcacctcatccacacccatgcttggggtgaagttttctgcagataagcctatc
gctgaggtcccaagcagtatgacaatcctggacaaaaaagacggggaacaggctaaagcc
ttattcgagaaggtgagaaaattcagagctcatgtcgaggacagtgatttcatctacaag
ctttatgtagcgcagaccatcgtcaaaacggtcaagtttattttgatattgtcctacact
tcaacctttatggctgagattaattttaaacacagctgtaaacctgatattaaacagtta
acagggtacagagagttcttttgtacgcacaacatggctttcatgctaaacaagctgctc
attagttacatggctctgattttgatctatgggatggcgtgcctgtactctctcttctgg
gtgtttcggcggcctctgaaagagtactcgttcgagaaggtcagggaagagagcagcttc
agtgacattcctgacgtcaaaaatgactttgcattcctcttgcacatggttgaccagtac
gaccaactctactctaagcgcttcggtgtcttcttgtccgaggtcagcgaaaacaagctg
agggagatcagcctcaatcacgagtggacctttgagaagctaaggcagcttgtgacccgt
aacgcacaggaccaacaggagctgcaccttttcatgctttctggactcccgaatgcagtg
tttgacctcacagacctggaggtgcttaaactggagctgattcccgaggtgaggttctcg
gcaaaggtctcccagatgaccagcctgcaggagctgcatctctgccactgccccgccaaa
gtagagcagacaggttttgctttcctccgcgaccatcttcgctgccttcacgtcaagttc
actgatgttgcagagatcccagcttgggtgtatttgctaaggagtttgagggagctgaac
ttaatcggcaacttgagctcagaaaataacaaaatgatcggtctagagtccatgcgggat
ttgaggcatttaaagacattatgcctgaagagcaacctcactaagatgcccacaaatatc
acagagctttcaccacatttgattaaattagtagtgcacaatgatggtacaaaactgctg
gtactaaatagtctgaaaaagatgacaagtctgattgaactggagctgtacagctgtgaa
ctggagaggattccccacgctattttcagcttgaccaacttacaggagctcgacctgaaa
tccaacaacatccgaaccatagaagagatcatcagcttccagcacctcaagaggctgacg
tgcctcaaactgtggcacaacaaaataatcaccatcccgtcctcaatcgggcaggtcaag
tctctggagtctctgcacctctcgcacaacaaacttgagtccctgcctccagccttgttc
actctacctaaactgaggcacttggacgtggcccacaactccatcatggtgctgcctcca
gacgtcggcctcctccacaacctccagcacttagccatcaactccaacaagctggaggtg
ctgcccaagcccctgttcagatgcaccaagctgagggtgctttgtctggggcacaatgcg
ctcaccgtgctgccggaggccgtgggtcagctggtccagctcactcagctggagctaaga
ggaaactgcctggacagactgcccgctctgctcggaaactgccgcatgctgcgcaaaaat
ggcttgattgtggaggaccatctcttcgacacactacctgtggacgttaaggagagcatc
agccgagagaccaacgtgtcctttacgagtggcttatag
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