Lates calcarifer (barramundi perch): 108883740
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Entry
108883740 CDS
T04895
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108883740 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108883740 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108883740 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108883740 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108883740 (cldn1)
04147 Exosome [BR:
lcf04147
]
108883740 (cldn1)
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108883740 (cldn1)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108883740 (cldn1)
Exosomal proteins of colorectal cancer cells
108883740 (cldn1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
DUF1218
DUF3112
Motif
Other DBs
NCBI-GeneID:
108883740
NCBI-ProteinID:
XP_050926071
UniProt:
A0A4W6FLG2
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All DBs
Position
LG4:17229652..17232427
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFSLAFLGFIGSIASTVMVEWKASSYAGDNIITAQALYEGLWKTCASQSTG
QIQCKVYDSLLQLPGIVQGTRGLMLSAILLCFIAILVEVVGMRCTTCMGDQPQQKDKVAL
AGGVIFIFAGLLALVGTCWYGHRIAQDFYDPFTPTNAKYEFGSALYVGWGAAFLILIGGG
FLCCNCSSKGSSGKSPRYPPSSAGQTGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcaggaatacagcttctcggcttctcgctggcctttctgggcttcattggc
tcgatagcatccacagtcatggtggagtggaaagcttcgtcctatgcaggagacaacatc
atcacagctcaggcgctgtatgaaggactgtggaagacctgtgcgtcacagagcacgggt
cagattcagtgtaaagtctatgattcacttctccagctcccagggattgtacagggcaca
cgagggctgatgttgtctgccatcttgctgtgctttattgccatcttggtggaggtggtt
ggcatgaggtgcaccacctgcatgggagatcaaccacagcagaaggacaaagtggcactg
gcaggaggggttatcttcatttttgctggtctgcttgctctggtgggaacatgttggtat
ggccacagaattgcacaggacttctatgacccattcactcccactaacgcaaagtatgaa
tttggaagtgccctgtatgttggatggggggctgcatttctcatcctgataggagggggc
ttcctctgctgcaactgctccagcaagggctcatcagggaagtctccacgctacccaccg
tcctctgccggccagacaggcagggactacgtctag
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